Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00186 ATGAGGCGGAATTGCAACTTGGAGCTTCGTCTTTTTCCTTCGTTTGAGACCAGTCACCTCCGTGACACTTCGACGGAACCAGATAGTGAAAGCCCGCAGCAAAATCTGCAGAAGCTCACCATTTTCTATGACGGGAAGATGTGTGTTTGCGATGTCACTGAATTTCAGGCGAGATCGATCTTGATGCTTGCAAATAGAGAAATGAAGGAAAGAGCAAGGACACCAAACGGGTCATCGGAGCCATGTTCACCAAATACAGTGCCATTGTACAGCCCAGGTGGTGGTCTTTCTATGAAAAGATCGCTCCAAAATTTCCTCCAGAAGAGAAAGAACCGAATCCTCGAAGCTTCCCCCTACCATCACTAG 366 0.4727 MRRNCNLELRLFPSFETSHLRDTSTEPDSESPQQNLQKLTIFYDGKMCVCDVTEFQARSILMLANREMKERARTPNGSSEPCSPNTVPLYSPGGGLSMKRSLQNFLQKRKNRILEASPYHH 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00186 121 MobiDBLite consensus disorder prediction 70 94 - -
Pral4774g00186 121 ProSiteProfiles Tify domain profile. 32 66 IPR010399 -
Pral4774g00186 121 Pfam Jas motif 99 119 IPR018467 -
Pral4774g00186 121 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 119 IPR040390 -
Pral4774g00186 121 SMART tify_2 32 66 IPR010399 -
Pral4774g00186 121 Pfam tify domain 34 65 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00186 Pral-Chr4774 1057733 1059327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00186 1 120 Tify Gene Family AT1G30135 47.244 2.04e-29 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral4774g00186 tify 5.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00186 - - cave:132172411 148.288