Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00165 ATGTCTGACGAACCGATGCCAACTCGATGGTCATTCCAGGATTTTAAATTGTTCTATGACGCCAAGTTTGGTAGGAAGAAAATCTTGGAGAATGGCGAGACAGCCGACAGTCCTGTCAGTAATGGAAATGGCAATCTACATCCCAAGAGAACATCGGATACGGCTATCTATGAGCAGTTTCAGAGCCAGAGTTCAAACCACTCAAATGGTTTTTTGCCAAACAATGTTGGTGATAGGCCTCAGAAGTCTCTGCTTCCTCCTTTTGAATCTGCAGAAATGCGTATTTTAGCTGAGAGCTTAAGTAGGGATATCATCCGTGGGAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAAACAGCCAAACGCTTACTGAAAGAGGCTGTTGTAATGCCAATCAAGTATCCCAAATACTTTACTGGTCTATTATCGCCTTGGAAAGGTATTCTTCTCTTTGGGCCGCCAGGGACAGGAAAGACAATGCTTGCAAAGGCCGTTGCAACAGAGTGCAAGACTACATTTTTTAATATTTCTGCCTCCTCTGTTGTCAGCAAATGGAGAGGCGATTCAGAGAAATTAGTTAGGGTACTATTTGAGCTTGCTAGGCACCACGCACCCTCAACAATATTTCTTGATGAGATTGATGCAATCATTAGTCAACGTGGTGAATCACGCAGTGAGCATGAAGCAAGTCGGCGGTTAAAAACTGAGCTACTTATACAGATGGATGGCTTGACACGGACTGATGAACTTGTTTTTGTTTTGGCGGCGACAAATATTCCGTGGGAACTGGACGCAGCCATGCTCCGGCGTCTTGAGAAGCGAATCCTTGTGCCACTTCCTGAACCAGAAGCAAGAGAAGCAATGTTTGAGGAACTCCTTCCACCACAGCCTGGTGAGGAGCAGATCCCCTATGACTTACTGGTGGAGCAGACAGAAGGATATTCAGGTTCAGATATTCGGTTACTCTGCAAAGAGGCAGCAATGCAGCCATTGAGACGCTTAATGTCACAACTTGAACAGAGAGAAGAGGTGGTGCCGGAAGAAGAATTGCCACAAGTAGGGCCTATCGGACCTAAAGATATAGAGATTGCTTTGAAGAACACAAGGCCGTCTGCTCATCTCCATACCCACAAGTACGAGAAGTTCAATGCTGATTATGGAAGTCAAATACTGCAATGA 1185 0.454 MSDEPMPTRWSFQDFKLFYDAKFGRKKILENGETADSPVSNGNGNLHPKRTSDTAIYEQFQSQSSNHSNGFLPNNVGDRPQKSLLPPFESAEMRILAESLSRDIIRGSPDVKWESIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFLDEIDAIISQRGESRSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNIPWELDAAMLRRLEKRILVPLPEPEAREAMFEELLPPQPGEEQIPYDLLVEQTEGYSGSDIRLLCKEAAMQPLRRLMSQLEQREEVVPEEELPQVGPIGPKDIEIALKNTRPSAHLHTHKYEKFNADYGSQILQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00165 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 378 IPR027417 -
Pral4774g00165 394 FunFam Katanin p60 ATPase-containing subunit A-like 2 109 293 - -
Pral4774g00165 394 Pfam AAA+ lid domain 307 344 IPR041569 -
Pral4774g00165 394 Gene3D - 109 385 IPR027417 -
Pral4774g00165 394 Pfam ATPase family associated with various cellular activities (AAA) 150 280 IPR003959 GO:0005524|GO:0016887
Pral4774g00165 394 FunFam Katanin p60 ATPase-containing subunit A-like 2 282 370 - -
Pral4774g00165 394 Gene3D - 282 370 - -
Pral4774g00165 394 SMART AAA_5 146 283 IPR003593 GO:0016887
Pral4774g00165 394 PANTHER AAA DOMAIN-CONTAINING 59 390 - -
Pral4774g00165 394 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00165 Pral-Chr4774 947093 954043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00165 144 353 Calmodulin-binding Proteins AT3G56690 37.037 4.91e-32 126