Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00164 ATGTCTGACGAACCGATGCCAACTCGATGGTCATTCCAGGATTTTAAATTGTTCTATGACGCCAAGTTTGGTAGGAAGAAAATCTTGGAGAATGGCGAGACAGCCGACAGTCCTGTCAGTAATGGAAATGGCAATCTACATCCCAAGAGAACATCGGATACGGCTATCTATGAGCAGTTTCAGAGCCAGGGGCAGAGTTCAAACCACTCAAATGGTTTTTTGCCAAACAATGTTGGTGATAGGCCTCAGAAGTCTCTGCTTCCTCCTTTTGAATCTGCAGAAATGCGTATTTTAGCTGAGAGCTTAAGTAGGGATATCATCCGTGGGAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAAACAGCCAAACGCTTACTGAAAGAGGCTGTTGTAATGCCAATCAAGTATCCCAAATACTTTACTGGTCTATTATCGCCTTGGAAAGGTATTCTTCTCTTTGGGCCGCCAGGGACAGGAAAGACAATGCTTGCAAAGGCCGTTGCAACAGAGTGCAAGACTACATTTTTTAATATTTCTGCCTCCTCTGTTGTCAGCAAATGGAGAGGCGATTCAGAGAAATTAGTTAGGGTACTATTTGAGCTTGCTAGGCACCACGCACCCTCAACAATATTTCTTGATGAGATTGATGCAATCATTAGTCAACGTGGTGAATCACGCAGTGAGCATGAAGCAAGTCGGCGGTTAAAAACTGAGCTACTTATACAGATGGATGGCTTGACACGGACTGATGAACTTGTTTTTGTTTTGGCGGCGACAAATATTCCGTGGGAACTGGACGCAGCCATGCTCCGGCGTCTTGAGAAGCGAATCCTTGTGCCACTTCCTGAACCAGAAGCAAGAGAAGCAATGTTTGAGGAACTCCTTCCACCACAGCCTGGTGAGGAGCAGATCCCCTATGACTTACTGGTGGAGCAGACAGAAGGATATTCAGGTTCAGATATTCGGTTACTCTGCAAAGAGGCAGCAATGCAGCCATTGAGACGCTTAATGTCACAACTTGAACAGAGAGAAGAGGTGGTGCCGGAAGAAGAATTGCCACAAGTAGGGCCTATCGGACCTAAAGATATAGAGATTGCTTTGAAGAACACAAGGCCGTCTGCTCATCTCCATACCCACAAGTACGAGAAGTTCAATGCTGATTATGGAAGTCAAATACTGCAATGA 1191 0.4559 MSDEPMPTRWSFQDFKLFYDAKFGRKKILENGETADSPVSNGNGNLHPKRTSDTAIYEQFQSQGQSSNHSNGFLPNNVGDRPQKSLLPPFESAEMRILAESLSRDIIRGSPDVKWESIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFLDEIDAIISQRGESRSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNIPWELDAAMLRRLEKRILVPLPEPEAREAMFEELLPPQPGEEQIPYDLLVEQTEGYSGSDIRLLCKEAAMQPLRRLMSQLEQREEVVPEEELPQVGPIGPKDIEIALKNTRPSAHLHTHKYEKFNADYGSQILQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00164 396 Gene3D - 284 372 - -
Pral4774g00164 396 FunFam Katanin p60 ATPase-containing subunit A-like 2 284 372 - -
Pral4774g00164 396 MobiDBLite consensus disorder prediction 62 86 - -
Pral4774g00164 396 FunFam Katanin p60 ATPase-containing subunit A-like 2 111 295 - -
Pral4774g00164 396 Gene3D - 111 387 IPR027417 -
Pral4774g00164 396 SMART AAA_5 148 285 IPR003593 GO:0016887
Pral4774g00164 396 PANTHER AAA DOMAIN-CONTAINING 61 392 - -
Pral4774g00164 396 Pfam ATPase family associated with various cellular activities (AAA) 152 282 IPR003959 GO:0005524|GO:0016887
Pral4774g00164 396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 380 IPR027417 -
Pral4774g00164 396 MobiDBLite consensus disorder prediction 62 78 - -
Pral4774g00164 396 Pfam AAA+ lid domain 309 346 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00164 Pral-Chr4774 947093 954043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00164 146 355 Calmodulin-binding Proteins AT3G56690 37.037 5.50e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00164 K07767 - jre:108982751 657.907