Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00152 ATGTCACTTTCCTGTGCAAAAAACTTCTTCCAGAGGTTCTGGGTCGATGAGTTCCAAATGGGAAGTTTTGCACATAGCAGCTTTCTGTCTAGTGATCTGCTGCCATCCCTGGGAGCCCGAATCAACCAAGAAACTAGACTTCGAAGATACATAGTCTCCCCTTTCAACCCCTGGTATAGGGCTTGGGAGATGTTACTGATTATCCTGGTCATCTACTCAGCCTGGATTTGCCCCTTTGAGTTTGCCTTTCTTCCTTACAAGCAAGATGCACTATTTATCATCGACAACACTGTCAATGGCTTCTTTGCCGTTGACATCGTCCTGACATTTTTTGTTGCATATCTTGATAGCCACTCCTACCTTCTTGTTGACGATCACAAGAAAATTGCAGCGAGGTACCTATCCTCCTGGTTCATTTTCGATGTCTGCTCAACGGCACCATTTCAGTCCATCAGCCTACTCTTCACGAAACATAGCGGTGAGCTTGGCTTTAAACTGCTTAACATGCTTCGGTTATGGCGTCTGAGACGTGTCAGCTCTCTGTTTGCAAGGCTTGAGAAAGACATCCGCTTCAATTATTTCTGGACTAGGTGCACAAAGCTCATTTCTGTAACTTTGTTTGCAGTGCATTGCGCCGGATGCTTTAATTATCTGCTTGCAGATAGATACCCTGATTCTAAAAGGACATGGATTGGTGCGGTGTACCCAAATTATAAGGAACTGAGTCTCTGGGACAGATATGTGACTTCAATATATTGGTCCATTGTCACACTCACAACTACTGGCTACGGAGACTTGCATGCTGAAAACACAGGAGAGATGCTCTTTGATATCTTCTACATGCTGTTCAACTTGGGATTAACGTCATATATCATTGGAAACATGACAAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAATTTTAGAGACACAGTAAGAGCAGCTTCAGAGTTTGCTTCAAGAAACCATTTGCCCCATCACATACAAGATCAAATGTTGTCGCACTTGTGTTTGAGATTTAAAACAGAAGGATTGAAGCAACAAGAAGCACTAAATGGTCTGCCTAAGGCCATTAGTTCAAGCATTTCACACCATCTATTTTTTCCCATACTGCAGAAAGTCTACCTCTTCCAAGGAGTTTCTCATGACCTTCTTTTCCAACTGGTTTCAGAAATAGAAGCAGAATATTTCCCACCCAAGGAAGAAGTGATCCTGCAAAACGAGTCTCCAACAGACCTTTATGTACTCGTTTCAGGGGCAGTGAATATTATTCGCTACATTGACGGACAAGATCAAGTTATCGGTAAGGCAACTGCAGGAGATGCATTTGGTGAGATTGGGGTTTTATACTACAGACCTCAGCCTTTCACAGTTCGGACGCAGGAGCTTTCTCAAATATTAAGACTTAGCAGAACTTCCTTAATGAATGCCATTCAAGCAACAAAAGAAGATGCACAGATTATAATGAACAATCTTTTCATGAAACTTAGGGCACAAGACATGGGCTCTGAATATTTCCATGAAATGCTTGATGGAAGAAGAATAGGAGGCTGTAGGAAAAATTCAAATGGAAATTCCATAATGAATGAAGGAGAATACAAAGATGTTACAGTCTCGGAGAACACTATTCGTGATGCTGCAGAGGACAGTCAAGGAGATATGGTTGAAATTTTGCTCCAAAGAGACGCAAATGCAAAGAGTTCGATTTCCCAACCACGGACTCCAAAATTTCCAATAGAACAGCAAGAAAACCAGAGCGTTTCTGACCTCTTAATGAGTGGTGAAAATAGGAGAAAATCAGATGAATATAGAATAGATTTGGTCACTAGGAATGATCCAACCAGAAGCAGAAGACATGATGGTCGCAGGCCTATCGACTTCCCAGTAGAAAAAGTATACCCAAACTCTTATTCAGGAAATACCAATGCCCCAGGTGATATAGAAGTGGCAAAAAGCATCAAAAAGAGAGTTACCATCCACTTGATCTGTGAATACTGTAACACTTCTCAGGGGCATGGGAAATTGATACTTTTACCTCATTCATTAGAAGAGCTGCTCAGGGTTGCTGGTCAAAAATTTGAAGGTTCCAAACCTACAAACGTTGTTACCTCAGAAAATGCAGAGATAGATGACATAAGCATCATTCAAGATGGTGATCATCTCTTTCTTCTTTGCAGTGATAGAGAACATTTGAGTTCATGA 2205 0.4177 MSLSCAKNFFQRFWVDEFQMGSFAHSSFLSSDLLPSLGARINQETRLRRYIVSPFNPWYRAWEMLLIILVIYSAWICPFEFAFLPYKQDALFIIDNTVNGFFAVDIVLTFFVAYLDSHSYLLVDDHKKIAARYLSSWFIFDVCSTAPFQSISLLFTKHSGELGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNYLLADRYPDSKRTWIGAVYPNYKELSLWDRYVTSIYWSIVTLTTTGYGDLHAENTGEMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNHLPHHIQDQMLSHLCLRFKTEGLKQQEALNGLPKAISSSISHHLFFPILQKVYLFQGVSHDLLFQLVSEIEAEYFPPKEEVILQNESPTDLYVLVSGAVNIIRYIDGQDQVIGKATAGDAFGEIGVLYYRPQPFTVRTQELSQILRLSRTSLMNAIQATKEDAQIIMNNLFMKLRAQDMGSEYFHEMLDGRRIGGCRKNSNGNSIMNEGEYKDVTVSENTIRDAAEDSQGDMVEILLQRDANAKSSISQPRTPKFPIEQQENQSVSDLLMSGENRRKSDEYRIDLVTRNDPTRSRRHDGRRPIDFPVEKVYPNSYSGNTNAPGDIEVAKSIKKRVTIHLICEYCNTSQGHGKLILLPHSLEELLRVAGQKFEGSKPTNVVTSENAEIDDISIIQDGDHLFLLCSDREHLSS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00152 734 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral4774g00152 734 MobiDBLite consensus disorder prediction 566 596 - -
Pral4774g00152 734 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Pral4774g00152 734 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4774g00152 734 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4774g00152 734 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4774g00152 734 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4774g00152 734 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4774g00152 734 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4774g00152 734 SMART cnmp_10 377 494 IPR000595 -
Pral4774g00152 734 Gene3D Jelly Rolls 344 506 IPR014710 -
Pral4774g00152 734 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Pral4774g00152 734 MobiDBLite consensus disorder prediction 566 594 - -
Pral4774g00152 734 FunFam Potassium channel KAT3 61 301 - -
Pral4774g00152 734 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Pral4774g00152 734 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Pral4774g00152 734 PANTHER POTASSIUM CHANNEL AKT1 25 501 IPR045319 GO:0005249|GO:0006813
Pral4774g00152 734 CDD CAP_ED 377 490 IPR000595 -
Pral4774g00152 734 FunFam Potassium channel KAT2 365 501 - -
Pral4774g00152 734 Pfam KHA, dimerisation domain of potassium ion channel 656 724 IPR021789 -
Pral4774g00152 734 Gene3D - 60 300 - -
Pral4774g00152 734 ProSiteProfiles KHA domain profile. 657 734 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00152 Pral-Chr4774 883991 888750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00152 1 724 Ion Channels AT5G46240 60.354 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00152 K21867 - qsa:O6P43_012963 1013.45