Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00149 ATGAGTATGCATGCTTGCATGCTGTTCATCCATGCATCTTGCCTGTGTCGAAGTAATCTTTACCCTTCAGTTGACTTTGAAATCTTTGAGAAGAACCCAACAAAGATAAAGAACTATGGTATTTGGCTGCGGTATCAGAGCAGGACTGGCTACCACAACATGTACAAGGAATACCGTGATACCACTCTAAATGGTGCTGTGGAGCAGATGTACAATGAGATGGCTTCCCGCCACAGGGTCCGGTCCCCCTGCATTCAAATTATTAAGACCGCCACGATCCCAGCAAAGCTTTGCAAAAGGGAGAGCACCAAACAGTTCCACAACTCCAAAATCAAGTTCCCATTGGTTTTCAGGAAGGTCAGACCACCCACAAGAACGCTGAAGACCACATACAAGGCATCAAGGCCCAATTTGTTTATGTAA 423 0.4563 MSMHACMLFIHASCLCRSNLYPSVDFEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRTLKTTYKASRPNLFM 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00149 140 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 27 90 IPR023573 GO:0003735|GO:0005840|GO:0006412
Pral4774g00149 140 SUPERFAMILY RplX-like 33 108 - -
Pral4774g00149 140 PANTHER 60S RIBOSOMAL PROTEIN L18A 27 139 IPR028877 -
Pral4774g00149 140 FunFam 60S ribosomal protein L18a 34 109 - -
Pral4774g00149 140 PIRSF Ribosomal_L18a 22 140 IPR021138 GO:0003735|GO:0005840|GO:0006412
Pral4774g00149 140 Gene3D - 31 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00149 Pral-Chr4774 854474 856747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00149 27 140 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 91.228 1.51e-76 224