LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4774g00141	ATGGTTTGGAGAAATCTGGAGCAAATTAGACTCACGGCCAAAGAATTAGGGAATTTGGCATTCTCGCTTGTGAAAATCCCCTTTTCTCTTCATGTCACTGTTGCCTATGGCCCGAGCATGCTTCCGACAATAGGTCCGATGGCTACCTTTTTATTGGCCGAAAGGAACTCCCCACGTTTTGGTAAAGTTGAGCGCGGGGATATTGTCGTTGTGCAGTCACCTGAAAACCCTCAAAAGTTCATAGTCAAGCGCTTGCTTGGATTGCAGGGTGATAGTGTCACATTCCTTGTGGATCCTAAGAACAGTAATAAACGCAAGACTGTAGTGGTCCCCAAGGGACACGTTTGGCTAGGGGGAGATAACATATATAATTCCAGGGATTCAAGATATTTTGGTCCTGTTCCTTGTGATCTTCTTCATGCCAGGGTCTTCTGGAGGGTATGGCCACTTGGGGATTTTGGACCCATGGGTAAAAACTGA	480	0.4625	MVWRNLEQIRLTAKELGNLAFSLVKIPFSLHVTVAYGPSMLPTIGPMATFLLAERNSPRFGKVERGDIVVVQSPENPQKFIVKRLLGLQGDSVTFLVDPKNSNKRKTVVVPKGHVWLGGDNIYNSRDSRYFGPVPCDLLHARVFWRVWPLGDFGPMGKN	159

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4774g00141	159	Gene3D	Umud Fragment, subunit A	27	154	-	-
	Pral4774g00141	159	FunFam	Inner membrane protease subunit 1	27	155	-	-
	Pral4774g00141	159	SUPERFAMILY	LexA/Signal peptidase	29	156	IPR036286	-
	Pral4774g00141	159	PANTHER	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	29	158	-	-
	Pral4774g00141	159	CDD	S26_SPase_I	32	143	IPR019533	GO:0004252\|GO:0006465
	Pral4774g00141	159	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	28	44	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Pral4774g00141	159	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	81	93	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Pral4774g00141	159	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	110	129	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Pral4774g00141	159	Pfam	Signal peptidase, peptidase S26	26	95	IPR019533	GO:0004252\|GO:0006465
	Pral4774g00141	159	Pfam	Signal peptidase, peptidase S26	106	148	IPR019533	GO:0004252\|GO:0006465

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4774g00141	Pral-Chr4774	802381	803306	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4774g00141	40	157	MADS-box Gene Family	AT1G29960	55.085	9.70e-46	144

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4774g00141	K09647		-	rcu:8264145	187.578