Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00138 ATGCCTCCAAAGATCAGTTTGACTATACTCATAGTCTTGTTCATTTCCATTTCAACTATACTTTCAAATGCTGAATCAAGCTCCCTGGAAGTTGAAATTGAAGCTTTGAAAGCTTTCAAAAGCTCTATCACTCACGACCCAAATGGAGCATTGGCAGATTGGGTTGACACAACCCATCATTGCAACTGGTCTGGCATTGCTTGTGACCCGTCTTTACAACATGTTACCTCACTCAGTCAGGTTGGCCAAAAGCTCCAAGGTAAGATTTCACCATTCCTGGGCAATCTTTCTGGCCTCCAGATTCTTGACTTAACCTCAAATTCATTTTCTGGGCTCATTCCTCCTCAGCTCAGCTTTTGCTCCCAGCTTTCTCAATTGGTTCTTTTTAACAACTCTCTCTGGGGTCCAATCCCACCTGAGCTAGGAAACTTGAAAGGCCTGCAGTATTTGGATTTGGGTAATAACAATCTGAATGGAAGCCTCCCAGAAAGCTTATTTAACTGCACCTCTTTGCTAGGTATTGCTTTTAATTCTAACAATCTGGATGGTAAAATTCCTTCAAATATTGGCAACTTGGTTAACGTTACGCTAGTCGCAGGATTTACTAATAAGTTTGTTGGATCTATTCCTCCTTCAATAGGTAAGTTAAGGGCTTTGCAATCTCTAGATTTTAGTCAAAACCAGTTGTCAGGAGGCATACCTAGAGAGATTGGGAACCTCGGAAATTTAGAATATCTTGTTCTATTTGAGAATTCCTTGGTTGGAAAAATCCCTTCTGAACTTGGTCAGTGCATGAAGCTAGTGAACCTTGAACTATACACAAATCAGTTGTCTGGAAGCATTCCTTTCGAGCTCGGAAACTTAGTTCATTTGGAGACATTAAGGATATATGGCAATAACTTCACCTCCACAATTCCTTCTTCCATTTTCCAGCTGAAATTATTAACCAACTTGGGTCTGTCACAGAATCGGTTAGAGGGAATAATATCTCCTGAAATTGGATCTTTGAAATCACTTAAAGTTCTAACCCTGCATTCAAATAAGTTTACTGGACAAATTCCTCCATCAATCACAAACTTGACAAACTTAACATATCTCTCAATGAGCCAGAATCTCCTTTCAGGTAGACTTCCTTCCAACATAGGAGTGCTTCATAATTTGAAGTTTCTAGTCTTGCACGCCAACCGTTTTCATGGTCATATCCCCCCTAGTATTACCAATTGTACTAGTATGGTGAATGTAAGTTTAGCCTTTAATTCACTAAATGGGAACATTCCTGAAGGCTTTTCAAGGATGCCTAATCTTACTTTCTTGTCTTTTGCATCAAACAAAATGTCCGGTGAAATCCCAGATGATCTCTTCAACTGCTCAAATCTTCGAACTCTAAGTTTGGCTGAGAACTACTTTAGTGGGATGCTAAAACCTATTATCCAAAACCTGTTCAATCTCAGGATGCTTCAGCTGAATTTAAATTCTTTCACAGGGCCTATTCCACTTGAAATAGGGAATTTAAATCAACTTGTGACATTATCACTTTCTGATAATAGATTTTCTGGTCACATTCCTTTAGAGCTATCCAACCTCAGTCTTCTTCAGGGTCTATACTTGCATGGGAATGCATTGGAAGGAACAATACCAAATCAGTTCTTTGAACTAAATCAGCTAACAGAGCTTGAGCTACATGAGAACAAGCTGGTTGGTCAAATCCCAAAGGCTTTCTCCAAGCTTAAGATGCTTTCTTACTTAGACCTCCATGGGAACATGTTCAATGGATCAATTCCAAGAGAGTTGAGACAGCTCAGCCAGCTCTTGATGCTGGATTTGTCACAGAACCACCTGACTGGGTCAATTCCTGGGGATGTCATCGTATATTTTAGAGGCATGCAGCTATATCTCAATTTGTCTCATAACCACTTTATTGGAAGTATACCGGAAGAGCTTGGTATGATGGAAATGGTACAAGCCATTGATTTTTCAAACAACAATCTATCTGGTGTCATTCCCAAGACACTTTCAGGGTGCAGAAATCTATTTAATCTTGATCTTTCAGGCAACAATATCTCAGGTCCTATTCCAGAAAAGGCTTTCAATCGCATGGACTTACTTCAAAGCTTGAACCTTTCAATGAACCAATTAGATGGAGAAATCCCCGAGACATTGTCAAAGCTCCAGCATCTTGTTTCTTTGGATCTTTCTCATAATGACTTGAAGGGATCTATCTCTGATAATTTTGCCAACCTCTCCAATCTAAAGCTTCTCAACCTTTCTTTTAACCAACTTGAAGGTCAAGTTCCATCAAACGGAATATTCTCACATATAGATGCAGCTGCATTGATAGGAAACCCTGCTCTTTGTGGAACCAAATTTCTGATGCCATGCAGGGAAACAACTAAGAGATCTCATTCATTATCCAGGAAGAGCATAATTATTATTGCCTCACTTGGATCGGTTGCTGTCCTCCTAATTTTGGTATTGGTGACTCTATTTCTCATACGACAGGCCAGATCACGTCGTTCTAACAAGCTTGAGAATCATGGAATACCAAACTACACATCGGCTTTGACACCTGAAAGATTTGATAGAAAGGAGCTAGAAAATGCTACTAGTTCTTTCAGCTCAGATAACATCATTGGAGCTAGCAATTTGAGCACTGTCTATAAGGGTCAATTGGGAGACGGCAAGAAAGTGGCAATAAAAAAACTGAACTTGGACTATTTTTCTGCAGAATCTGACAAACTTTTCAAGAGAGAAATAAGCACCTTGAGCCAACTAAGGCATAGGAATTTGGTCAAGGTAGTGGGTTATGCTTGGGAGAGTAGGAAAATAAAGGCTCTAGTTTTGGAGTACATGCAGAATGGCAATTTGGATAGCATAATACATGAAGAAGGGATGGATCGATCTAGATGGACATTATCTGAAAGGCTCAACGTTTTCATGTCTGCTGCTGATGCATTGGGTTACTTGCACTCTGGTTATGATATTCCAATTGTGCATTGTGATTTAAAGCCTTCCAATATTCTTTTGGATGGAGACTGGGTGGCCCATGTGAGTGATTTTGGGACAGCTAGAATGCTTGGTCTCCATTTGCAAGATGGTGCTTCTGTGTCCTCGTCAGCAGCTTTCCAAGGCACCGTTGGTTATTTGGCTCCAGAGCTTGCGTACATGAGGAAAGTAACGACCAAAGTTGATGTGTTCAGCTTTGGTATAGTAGTAATGGAGTTTCTAACAAGAAGGAGACCAACAGGGCTCACAGAAGAGGATAGTCTGCGTCAAATAGTGCAGAAAGCACTGGCAAAGCAACATGTTCTTCAACTTGTGGATCCTTTGCTCTCTGAGGAGAAGGAACATCAGGAAGATGTCTTAGTGGAGCTGTTGAAACTATCATTGAGTTGTACTCTCCCTGATCCTGAACATCGACCTAGTATGAACCAAGTGTTGTCTGTCTTGATGATGCTTAAGAAGAAAATATCATAG 3474 0.4033 MPPKISLTILIVLFISISTILSNAESSSLEVEIEALKAFKSSITHDPNGALADWVDTTHHCNWSGIACDPSLQHVTSLSQVGQKLQGKISPFLGNLSGLQILDLTSNSFSGLIPPQLSFCSQLSQLVLFNNSLWGPIPPELGNLKGLQYLDLGNNNLNGSLPESLFNCTSLLGIAFNSNNLDGKIPSNIGNLVNVTLVAGFTNKFVGSIPPSIGKLRALQSLDFSQNQLSGGIPREIGNLGNLEYLVLFENSLVGKIPSELGQCMKLVNLELYTNQLSGSIPFELGNLVHLETLRIYGNNFTSTIPSSIFQLKLLTNLGLSQNRLEGIISPEIGSLKSLKVLTLHSNKFTGQIPPSITNLTNLTYLSMSQNLLSGRLPSNIGVLHNLKFLVLHANRFHGHIPPSITNCTSMVNVSLAFNSLNGNIPEGFSRMPNLTFLSFASNKMSGEIPDDLFNCSNLRTLSLAENYFSGMLKPIIQNLFNLRMLQLNLNSFTGPIPLEIGNLNQLVTLSLSDNRFSGHIPLELSNLSLLQGLYLHGNALEGTIPNQFFELNQLTELELHENKLVGQIPKAFSKLKMLSYLDLHGNMFNGSIPRELRQLSQLLMLDLSQNHLTGSIPGDVIVYFRGMQLYLNLSHNHFIGSIPEELGMMEMVQAIDFSNNNLSGVIPKTLSGCRNLFNLDLSGNNISGPIPEKAFNRMDLLQSLNLSMNQLDGEIPETLSKLQHLVSLDLSHNDLKGSISDNFANLSNLKLLNLSFNQLEGQVPSNGIFSHIDAAALIGNPALCGTKFLMPCRETTKRSHSLSRKSIIIIASLGSVAVLLILVLVTLFLIRQARSRRSNKLENHGIPNYTSALTPERFDRKELENATSSFSSDNIIGASNLSTVYKGQLGDGKKVAIKKLNLDYFSAESDKLFKREISTLSQLRHRNLVKVVGYAWESRKIKALVLEYMQNGNLDSIIHEEGMDRSRWTLSERLNVFMSAADALGYLHSGYDIPIVHCDLKPSNILLDGDWVAHVSDFGTARMLGLHLQDGASVSSSAAFQGTVGYLAPELAYMRKVTTKVDVFSFGIVVMEFLTRRRPTGLTEEDSLRQIVQKALAKQHVLQLVDPLLSEEKEHQEDVLVELLKLSLSCTLPDPEHRPSMNQVLSVLMMLKKKIS 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00138 1157 CDD STKc_IRAK 877 1150 - -
Pral4774g00138 1157 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 831 949 - -
Pral4774g00138 1157 Gene3D Ribonuclease Inhibitor 628 802 IPR032675 -
Pral4774g00138 1157 Gene3D Transferase(Phosphotransferase) domain 1 950 1157 - -
Pral4774g00138 1157 ProSiteProfiles Protein kinase domain profile. 871 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00138 1157 SUPERFAMILY L domain-like 376 472 - -
Pral4774g00138 1157 Gene3D Ribonuclease Inhibitor 267 381 IPR032675 -
Pral4774g00138 1157 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Pral4774g00138 1157 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 29 183 - -
Pral4774g00138 1157 SUPERFAMILY Protein kinase-like (PK-like) 850 1151 IPR011009 -
Pral4774g00138 1157 SMART serkin_6 871 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00138 1157 SMART LRR_sd22_2 723 746 - -
Pral4774g00138 1157 SMART LRR_sd22_2 360 383 - -
Pral4774g00138 1157 SMART LRR_sd22_2 552 584 - -
Pral4774g00138 1157 SMART LRR_sd22_2 216 242 - -
Pral4774g00138 1157 SMART LRR_sd22_2 504 530 - -
Pral4774g00138 1157 SMART LRR_sd22_2 144 176 - -
Pral4774g00138 1157 PRINTS Leucine-rich repeat signature 726 739 - -
Pral4774g00138 1157 PRINTS Leucine-rich repeat signature 747 760 - -
Pral4774g00138 1157 Gene3D Ribonuclease Inhibitor 193 266 IPR032675 -
Pral4774g00138 1157 Gene3D Ribonuclease Inhibitor 382 621 IPR032675 -
Pral4774g00138 1157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Pral4774g00138 1157 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 434 1149 - -
Pral4774g00138 1157 Pfam Leucine rich repeat 554 613 IPR001611 GO:0005515
Pral4774g00138 1157 Pfam Leucine rich repeat 632 687 IPR001611 GO:0005515
Pral4774g00138 1157 Pfam Leucine rich repeat 691 736 IPR001611 GO:0005515
Pral4774g00138 1157 SMART LRR_typ_2 650 673 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 699 722 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 144 168 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 240 264 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 600 624 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 384 408 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 747 772 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 336 360 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 552 575 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 504 528 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 96 120 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 576 599 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 432 456 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 288 312 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 216 239 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 723 746 IPR003591 -
Pral4774g00138 1157 SMART LRR_typ_2 674 698 IPR003591 -
Pral4774g00138 1157 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 950 1157 - -
Pral4774g00138 1157 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 625 797 - -
Pral4774g00138 1157 SUPERFAMILY RNI-like 71 398 - -
Pral4774g00138 1157 Gene3D Phosphorylase Kinase; domain 1 832 949 - -
Pral4774g00138 1157 SUPERFAMILY L domain-like 469 804 - -
Pral4774g00138 1157 Pfam Leucine Rich Repeat 99 120 IPR001611 GO:0005515
Pral4774g00138 1157 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 184 282 - -
Pral4774g00138 1157 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Pral4774g00138 1157 Pfam Protein kinase domain 873 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00138 1157 FunFam Leucine-rich repeat receptor-like protein kinase TDR 358 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00138 Pral-Chr4774 792263 796572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00138 28 1155 Receptor kinase-like Gene Family AT5G46330 53.503 0.0 1126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4774g00138 Pkinase 6.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00138 K13420 - gmx:100817960 1532.31