Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00097 ATGCCGGAAGGATCAACAACAGATTCATCGGGCAAGCAGAAGGTTCCCTTTCACAAGCTCTTTACCTTCGCGGACCGTCGCGACGTGATCTTGATGACCATCGGTACGATCTGTGCGGTGGCCAATGGGTTATCACAGCCTCTCATGACACTGATTTTTGGGAAGCTCATCAACACTTTTGGTTCGACTGATCAATCACGCATTGTGCATGAAGTTTCTAAGGTTGCATTACTTTTCGTATACCTGGCTATTGGTTCTGGCGTTGCTTCATGTCTCCAGGTAGCTAGTTGGATGGTGACAGGAGAAAGACAAGCCGCAAGGATCCGTGGATTGTACTTGAAAACAATATTAAGACAGGACATTGCCTTCTTCGACACTGAAACAACCACAGGGGAGGTCATTGGTAGGATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATGCAACTTGCTTCTACTTTTGTTGGTGGTTTTGTGGTTGCCTTTACAAGAGGATGGCTACTTGCTCTGGTTTTGCTTTCATGTGTTCCATTTGTTGTCATTGCTGGTGGGATCGCGTCAATGTTTGTGGCAAAAATGTCAAGTCGTGGACAACTTGCTTATGCAGAAGCAGGAAATGTGGTTGAACAAACTGTTGGAGCCATTAGAACAGTTGCGTCTTTCACTGGGGAGAAGAAAGCAGTAGAAAAGTATAATAGCAAGTTGAAAGTTGCCTATAAAACAGTGGTTCAACAAGGGATGGCCACTGGACTAGGATTTGGAGTTGTTCTGTTCATAATCTTCAGCACCTATGGACTTGCAATGTGGTACGGAGCCAAACTGGTCCGTGAGAGGGGGTACAATGGAGGAGCTGTCATCACTATAATTATCGCGCTTATGACGGGTGGAATGGCATTGGGACAGACATCGCCAAGTCTTAATGCATTTGCAGCAGGTCAAGCTGCTGCATACAAGATGTTTGAGACTATTAAAAGAACACCCAAAATTGATGCTTATGACACTAATGGGGTTGTCTTGGAGGACATCAAGGGAGATATTGAACTTAAAGATGTTTACTTCAGATACCCTGCAAGGCCAGACGTACAGGTTTTTGCTGGATTCTCACTGTATATTCCAAGCGGCACGACTACTGCTTTAGTGGGTCAAAGTGGAAGCGGAAAGTCAACTGTAGTTAGTTTGTTAGAAAGATTCTATGACCCTGATGCTGGTGAAGTACTTATAGACGGTGTTAATTTGAGGGACTTTAAACTTCGATGGATAAGAGAAAAGATTGGGCTTGTTAGTCAGGAGCCGATGTTATTTACAGGCACCATCAAAGAAAATATAGCATATGGTAAGGATAATGCAACCGACGGGGAAATAATTACAGCAACAAAGCTTGCCAATGCTGCAAAATTTATTGACAAAATGCCAATGGGCCTTGATACCATGGTAGGGGAGCATGGAACTCAACTTTCTGGGGGACAAAAGCAACGGATTGCCATTGCAAGGGCAATTTTGAAGAACCCTAAAATCCTTCTCCTTGATGAAGCAACAAGCGCACTAGATGCTGAGTCTGAACGCATTGTTCAAGATGCATTGGTAAATGTCATGTTAAACAGGACCACCGTGGTTGTCGCTCATCGTTTGACAACTATTAGAAATGCTGACGCCATAGCAGTGGTGTATCAAGGGAAAATAGTGGAAAAAGGATCTCATGATGAGTTAATCCAGAATCCTGATGGTGCTTATTCTCAGCTTGTTCGTCTCCAAGAAGGCGCTGATGAAGCTGAAAGTGGAGAAAAATCTGAAACAGATAAGGCCACTACCGGTTATATAGACAAAAACATGTCTTCCTTTGAGAACCAAAAATCATCGCTGAGATCAATTAGCAGAGGGTCGTCAGGAAGGCTATCTTCTCACTCACTCAATCTTGCTATTTCTAATGGAACTAACATTTACCCTTCTGGAGAAGGAGGTGATGATCTTGGAAAAACCAAACCTGCTAATCTCGAGCGGCAAGAGGTTTCCATTATGCGTTTGGCCTATCTGAACAAACCTGAGACTCCCGTGTTATTGCTTGGATCTGTTGCTGCCGCAATACATGGCCTAGTTTTTCCTATATTTGGCCTCTTACTTTCATCAGCTATTAGAATGTTATATAAAACACCAGAGCAAATGAGGAAAGAATCCAAGTTTTGGGCGATTCTTTATGTGGTTTTGGGTTTGGTTTCTTTGGTTACTCTGCCATTACAAAATTACTTCTTTGGAGTTGCTGGTGGAAAATTAATAGAACGAATTCGTTCCTTGACATTTGAGAAGGTCGTGCACCAAGAAATCAGTTGGTTTGATGATCCTGCAAATTCAAGTGGCGCAGTTGGTGCAAGGTTATCTACAGATGCTTCAACAGTGAGAAGTCTTGTTGGTGACACCTTGGCCCTCATTGTGCAGAACATAGCAACAATAACAACAGGCCTCCTAATAGCATTTATAGCTAATTGGAGGCTATCGTTAGTGATTCTTGCTGTGTCACCTTTGATTCTCTTGCAAGGAGTATTTCAAATGAGGTTTCTGAAAGGGTTTAGTGCAGATGCTAAGCTGATGTATGAAGAGGCCAGTCAGGTGGCAAATGATGCAGTTGGTAGCATTAGAACTGTTGCATCATTCTGTGCTGAGCCAAAGGTCATGGAAATGTATAGGAACAAATGTGAAGGGCCAGAAAAACAAGGCATTCGACTAGGTCTTGTTAGTGGTGCTGGTTATGGCTTCTCTTTCTTTGCTTTATACTGCGCAAATGCTCTGTGTTTCTACGTAGGATCCATCTTTGTAAAGCAAGGATTAGCAAATTTTGGACAGGTTTTCAAGGTTTTCTTTGCTTTAACAATTACAGCAATTGGGGTTTCCCAGACCAGTGCCTTGGCACCAGACACCAATAAAGCCAAGGACTCCACAGCTTCAATATTTGAAATTCTGGACAGTAAACCCAACATTGACCCTAGTAGAGGCGAGGGCATGACATTAGGTTCTGTAAACGGTGATATTGAATTCAGAAATGTCAGCTTCAAATACCCTACAAGGCCTGATGTTCAGATTTTCAGAGATTTGATCCTAACCATACCTTCTGGCAAGACTGTTGCTTTGGTTGGAGAAAGCGGCAGTGGAAAATCTACAGTTATAAGTCTCCTACAGAGATTTTACGACCCTGATTCTGGACTCGTACTGTTAGATGGAATCGAAATCAAGAAGTTGAGGTTAAGCTGGTTGAGGCAGCAAATGGGTTTGGTCAGTCAAGAGCCAATTCTTTTCAATGAAACCATCCGTGAAAACATAGCTTATGGCAAAATAGGAGGAGCTAATGAAGAAGAGATAGTTGCAGCTGCTAAAGCAGCCAATGCATACGAGTTCATAAGCTCACTTCCAAGTGGTTTTGACACTTTAGTTGGGGAAAGAGGCACACAATTGTCAGGAGGCCAAAAGCAGAGGATTGCCATTGCAAGAGCCATATTGAAAAACCCAAAAATCCTATTGCTTGATGAGGCAACCAGTGCATTAGATGCGGAATCAGAGCGAGTGGTTCAAGAAGCTTTAGACAATGTCATGGTGAACAGAACCACTGTGGTGGTAGCCCATCGTCTCTCAACAATTAAAGGCGCTGATGTTATAGCAGTAGTGAAGAATGGAGTGATTGCTGAGAGGGGAAGTCATGAGGCCTTGATGAAGATTGAAGATGGGGTTTATGCTTCGTTGGTAGCTCTCCATATGAGTGCATCATAA 3777 0.4305 MPEGSTTDSSGKQKVPFHKLFTFADRRDVILMTIGTICAVANGLSQPLMTLIFGKLINTFGSTDQSRIVHEVSKVALLFVYLAIGSGVASCLQVASWMVTGERQAARIRGLYLKTILRQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFMQLASTFVGGFVVAFTRGWLLALVLLSCVPFVVIAGGIASMFVAKMSSRGQLAYAEAGNVVEQTVGAIRTVASFTGEKKAVEKYNSKLKVAYKTVVQQGMATGLGFGVVLFIIFSTYGLAMWYGAKLVRERGYNGGAVITIIIALMTGGMALGQTSPSLNAFAAGQAAAYKMFETIKRTPKIDAYDTNGVVLEDIKGDIELKDVYFRYPARPDVQVFAGFSLYIPSGTTTALVGQSGSGKSTVVSLLERFYDPDAGEVLIDGVNLRDFKLRWIREKIGLVSQEPMLFTGTIKENIAYGKDNATDGEIITATKLANAAKFIDKMPMGLDTMVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVNVMLNRTTVVVAHRLTTIRNADAIAVVYQGKIVEKGSHDELIQNPDGAYSQLVRLQEGADEAESGEKSETDKATTGYIDKNMSSFENQKSSLRSISRGSSGRLSSHSLNLAISNGTNIYPSGEGGDDLGKTKPANLERQEVSIMRLAYLNKPETPVLLLGSVAAAIHGLVFPIFGLLLSSAIRMLYKTPEQMRKESKFWAILYVVLGLVSLVTLPLQNYFFGVAGGKLIERIRSLTFEKVVHQEISWFDDPANSSGAVGARLSTDASTVRSLVGDTLALIVQNIATITTGLLIAFIANWRLSLVILAVSPLILLQGVFQMRFLKGFSADAKLMYEEASQVANDAVGSIRTVASFCAEPKVMEMYRNKCEGPEKQGIRLGLVSGAGYGFSFFALYCANALCFYVGSIFVKQGLANFGQVFKVFFALTITAIGVSQTSALAPDTNKAKDSTASIFEILDSKPNIDPSRGEGMTLGSVNGDIEFRNVSFKYPTRPDVQIFRDLILTIPSGKTVALVGESGSGKSTVISLLQRFYDPDSGLVLLDGIEIKKLRLSWLRQQMGLVSQEPILFNETIRENIAYGKIGGANEEEIVAAAKAANAYEFISSLPSGFDTLVGERGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERVVQEALDNVMVNRTTVVVAHRLSTIKGADVIAVVKNGVIAERGSHEALMKIEDGVYASLVALHMSAS 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00097 1258 CDD ABC_6TM_Pgp_ABCB1_D1_like 32 315 - -
Pral4774g00097 1258 MobiDBLite consensus disorder prediction 592 611 - -
Pral4774g00097 1258 FunFam ABC transporter B family member 1 1005 1255 - -
Pral4774g00097 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 592 IPR027417 -
Pral4774g00097 1258 Pfam ABC transporter 1035 1183 IPR003439 GO:0005524
Pral4774g00097 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 694 980 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4774g00097 1258 Gene3D - 1006 1257 IPR027417 -
Pral4774g00097 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 354 590 IPR003439 GO:0005524
Pral4774g00097 1258 MobiDBLite consensus disorder prediction 595 610 - -
Pral4774g00097 1258 Pfam ABC transporter 375 521 IPR003439 GO:0005524
Pral4774g00097 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1015 1252 IPR003439 GO:0005524
Pral4774g00097 1258 SUPERFAMILY ABC transporter transmembrane region 18 338 IPR036640 GO:0005524|GO:0016020
Pral4774g00097 1258 FunFam ABC transporter B family member 1 673 981 - -
Pral4774g00097 1258 SUPERFAMILY ABC transporter transmembrane region 681 999 IPR036640 GO:0005524|GO:0016020
Pral4774g00097 1258 CDD ABC_6TM_Pgp_ABCB1_D2_like 683 998 - -
Pral4774g00097 1258 ProSitePatterns ABC transporters family signature. 493 507 IPR017871 GO:0005524|GO:0016887
Pral4774g00097 1258 Gene3D ABC transporter type 1, transmembrane domain 77 989 IPR036640 GO:0005524|GO:0016020
Pral4774g00097 1258 FunFam ABC transporter B family member 1 344 593 - -
Pral4774g00097 1258 PANTHER ABC TRANSPORTER B FAMILY 7 748 IPR039421 -
Pral4774g00097 1258 CDD ABC_MTABC3_MDL1_MDL2 354 592 - -
Pral4774g00097 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1253 IPR027417 -
Pral4774g00097 1258 CDD ABC_MTABC3_MDL1_MDL2 1015 1251 - -
Pral4774g00097 1258 ProSitePatterns ABC transporters family signature. 1155 1169 IPR017871 GO:0005524|GO:0016887
Pral4774g00097 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 34 319 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4774g00097 1258 FunFam ABC transporter B family member 9 19 349 - -
Pral4774g00097 1258 Pfam ABC transporter transmembrane region 694 965 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4774g00097 1258 Pfam ABC transporter transmembrane region 32 303 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4774g00097 1258 Gene3D - 352 605 IPR027417 -
Pral4774g00097 1258 SMART AAA_5 381 567 IPR003593 GO:0016887
Pral4774g00097 1258 SMART AAA_5 1042 1235 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00097 Pral-Chr4774 544476 550433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00097 695 1257 Calmodulin-binding Proteins AT2G36910 43.034 1.71e-136 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00097 K05658 - qsa:O6P43_032068 1883.23