Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00089 ATGCCAGGGAACAGTTTTAACCGCAGTCCTACTCCTACTGCACCCACATCAAGATTAGAAAGGCTTCTGAGGGAAAGAGAGCTCAGGAAGTCCAACAGGCATTCTCAACCAGTTGAGGAGGCAAGAGACAGCAACAAAGATCTTGAACTTCATGGTGATTTGTGTTCGAGCGAGAGTGACATTCGTGAGGAAGAGTTATTTGAAAAGGATGCGGCTGCAAGATTGCCTGAAAGATTTCCAAGACAAGATGAACAGTCGAGTATCAAACAACGCTTATTGGTGGTGGCCAACAGATTGCCTGTGTCTGCTACTAGGAAGGGTGTGGATTCATGGCAACTTGAGATCAGTGTAGGGGGGCTAGTCAGTGCAATTTTAGGTGTAAGGGAATTTGACACTAGGTGGATTGGGTGGGCTGGCTTGAATGTGCCAGATGAAGTTGGGCAGAACTCATTGACTAAAGCTTTAGCTGAAAAGAGGTGCATCCCAGTATTTCTTGATGAGGAGCTAGCTCATCAATATTACAACGGTTACTGCAACAACGTCTTATGGCCTCTTTTTCATTACCTTGGACTTCCACAAGAGGACCGACTTGCTACCACTCGTACTTTCCAATCTCAATTTGATGCATACAAGATAGTAAACCAAATGTTTGCTGATGTGGTATATAGGCATTATGAGGAAGGTGATGTCGTCTGGTGCCATGATTACCACCTGATGTTTCTTCCAAAATGTTTAAAAGAACTCGATGAGAAAATGAAAGTTGGCTGGTTTCTCCACACACCGTTTCCTTCCTCAGAAATACATAGGACACTGCCATCCAGAACAGAACTGTTGAGATCTGTACTTGCTGCTGACTTGGTGGGGTTTCATACATATGATTATGCAAGGCATTTTGTTAGTGCCTGCACTAGAATTCTTGGACTTGAGGGTACACCTGAAGGAGTAGAAGATCACGGGAAGCTGATTCGTGTAGCTGCATTTCCTATTGGGATCGACTCTGAAAGATTTATCCGAGCCCTTGAACTCCCCCAAGTCCAGGATCAAATAAATGAACTGAAAGGACGATTTGCAGGCCGAAAGGTTATGCTGGGTGTTGATCGCCTTGATATGATAAAAGGAATCCCCCAAAAAATCTTGGCATTCGAGAAGTTCCTTGAGGAGAATCCTGACTGGCGGGATAAAGTAGTCTTGATACAAATTGCTGTTCCTACAAGAACTGATGTTGCTGAATACCAAAAGCTTACAAGCCAGGTGCATGAGATTGTTGGACGCATTAATGGGAGATTTGGAACACTCACTGCTGTTCCAATACACCACCTGGACCGATCACTTGACTTTCATGCATTATGTGCACTATATGCTGTTACCGATGTAGCACTCATCACATCTTTAAGGGATGGAATGAACCTTGTCAGCTATGAGTATGTTGCTTGCCAGGCTTATAAGAAGGGAGTTCTCATTCTAAGTGAGTTTGCGGGCGCAGCGCAGTCTCTCGGTGCCGGTGCTATCTTGATAAATCCATGGAATATCAACGAGGTTTCTGCCTCTATTGCTTATGCCTTGACCATGCCTGCTGATGAAAGAGAGAAACGTCATCAGTTCAACTTCAAGCATGTGATTACTCACACATCTCGGGAGTGGGCTGCAACATTCGTGAGCGAACTGAATGACACTATTGTTGAAGCTCAGCTTAGGACAAGACAAGTTCCACCCCCACTTCCTAATGAAGCTGCAGTTGATCGTTACTCAAAATCCAATAATCGATTAATCATTCTGGGTTTCAATGCCACTTTAACTGAACCAGTGGATGCCCTTGGGAGTGGCGGCCAAATTAAAGAAATGGAGCTTAAATTGCACCCAAATGTAAGAGATCCTTTAAAGAAGTTGTCTGATGATCCGAAGACAACAATAGTTGTCCTCAGTGGGAGTGATCGAGGCGTCCTGGACAAAAACTTCAGCGAATTCAACATGTGGCTGGCAGCAGAAAATGGGATGTTTTTACGTCTTACTTCTGGTGAATGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGCTGATAGTGTGAAGCAAGTTTTTGAGTACTTCACTGAAAGAACTCCTCGATCTCATTTTGAGCTGCGTGAGACTTCAGTTGTATGGAATTACAAGTATTCAGATGTTGAGTTTGGAAGACTTCAAGCCAGAGATCTACTGCAGCATCTTTGGACAGGCCCAATATCAAATGCATCACTTGATGTTGTCCAAGGTGGTAGATCTGTTGAGGTTCGAGCAGTCGGTGTCTCAAAGGGAGCAGCAATTGATCGGATTCTGGGAGAGATAATTCACCAGAAGGGCATGAAGGCACCTATTGATTATGTTCTCTGTGTTGGACACTTTCTGCCAAAGGATGAAGATGTGTACACATTTTTTGAGCCAGAGCTTCCCTCTGAGTCACCAACAATAGCAAGAGCTATGCTATCCAGCTCTAACAAGCCATCTCTGCCAAAATTCCATGGATCAAGCAAGTGTGGCTCCAAGGCAGCTCGACTCAAGAAGCAACGATCCATGTCGACTTTAGAAAGGAGAAAAATGGATCAAGCAATTGGGATTCCATTGCAGCCAACATATCGTGATAGAGTATCATTGCAGGAGGGTTCTTCGGTGCTTGATCTCAAAGGTGATAATTACTTCTCCTGTACTGTTTCGCGAAAGAGATCAAGCGCACGATATCTTCTTAAAACATCAGATAGTGTCGTCGAACTGTTGAAGGAGCTGGCGGATCAACTTGAATGA 2778 0.4417 MPGNSFNRSPTPTAPTSRLERLLRERELRKSNRHSQPVEEARDSNKDLELHGDLCSSESDIREEELFEKDAAARLPERFPRQDEQSSIKQRLLVVANRLPVSATRKGVDSWQLEISVGGLVSAILGVREFDTRWIGWAGLNVPDEVGQNSLTKALAEKRCIPVFLDEELAHQYYNGYCNNVLWPLFHYLGLPQEDRLATTRTFQSQFDAYKIVNQMFADVVYRHYEEGDVVWCHDYHLMFLPKCLKELDEKMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLIRVAAFPIGIDSERFIRALELPQVQDQINELKGRFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLIQIAVPTRTDVAEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALITSLRDGMNLVSYEYVACQAYKKGVLILSEFAGAAQSLGAGAILINPWNINEVSASIAYALTMPADEREKRHQFNFKHVITHTSREWAATFVSELNDTIVEAQLRTRQVPPPLPNEAAVDRYSKSNNRLIILGFNATLTEPVDALGSGGQIKEMELKLHPNVRDPLKKLSDDPKTTIVVLSGSDRGVLDKNFSEFNMWLAAENGMFLRLTSGEWMTTMPENLNMDWADSVKQVFEYFTERTPRSHFELRETSVVWNYKYSDVEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAVGVSKGAAIDRILGEIIHQKGMKAPIDYVLCVGHFLPKDEDVYTFFEPELPSESPTIARAMLSSSNKPSLPKFHGSSKCGSKAARLKKQRSMSTLERRKMDQAIGIPLQPTYRDRVSLQEGSSVLDLKGDNYFSCTVSRKRSSARYLLKTSDSVVELLKELADQLE 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00089 925 Gene3D Glycogen Phosphorylase B; 338 540 - -
Pral4774g00089 925 Coils Coil 910 925 - -
Pral4774g00089 925 CDD GT20_TPS 91 556 IPR001830 GO:0003824|GO:0005992
Pral4774g00089 925 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 680 760 - -
Pral4774g00089 925 SUPERFAMILY HAD-like 588 776 IPR036412 -
Pral4774g00089 925 Pfam Glycosyltransferase family 20 91 556 IPR001830 GO:0003824|GO:0005992
Pral4774g00089 925 CDD HAD_TPP 589 824 - -
Pral4774g00089 925 MobiDBLite consensus disorder prediction 27 51 - -
Pral4774g00089 925 Gene3D Glycogen Phosphorylase B; 82 337 - -
Pral4774g00089 925 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 559 - -
Pral4774g00089 925 Gene3D - 614 774 IPR023214 -
Pral4774g00089 925 Gene3D - 680 760 - -
Pral4774g00089 925 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 83 337 - -
Pral4774g00089 925 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 338 541 - -
Pral4774g00089 925 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 83 922 IPR001830 GO:0003824|GO:0005992
Pral4774g00089 925 FunFam Alpha,alpha-trehalose-phosphate synthase 614 683 - -
Pral4774g00089 925 Pfam Trehalose-phosphatase 612 829 IPR003337 GO:0003824|GO:0005992
Pral4774g00089 925 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 91 556 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00089 Pral-Chr4774 476533 483957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00089 1 922 Trehalose Biosynthesis Gene Families AT1G78580 72.622 0.0 1377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00089 K16055 - qsa:O6P43_012860 1502.65