Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00071 ATGGATGAAGCTCAGGGCAGTTCGAGCACCCTGCCTCCTTTCCTGACCAAGACTTATGAGATGGTGGACGATCCTTCCACAGATTCGATTGTTTCGTGGAGTGCCACTAACAAAAGTTTCATAGTATGGAATCCGCCAGAATTTGCAAGTGAGTTGCTACCAAGATTCTTTAAGCACAATAACTTCTCTAGTTTCATCAGACAGCTGAACACATATGGTTTTAGAAAAGTTGATCCAGAACAATGGGAATTTGCAAATGATGATTTCATAAGAGGTCAACAGCATCTTTTGAAGAATATACACAGACGAAAGCCAGTTCATAGCCATTCTTTACAGAATATCCAAGGACAAGGAGCTTCTCCATTGACAGAACCAGAAAGACAGAGTTTAAGAGGCAAAATAGAGAGGCTGAAACATGAAAACGAACAACTTTGTCTAGAGTTAGAGAGACATGAACAGGAGTGGCGAGTAAATGAAATTAAAATAGGATGCTCAAAGGAGAGATTGGAAAAGTTGGAAAGGAAAAAACAAAAGATGGTCTCTTCTGTTTCTCAAGCGTTGCAGAAACCTGAAATTGCCTCAAATCTCTTGCAATTGTCAGAAACCCTATATAGAAAACGAAGGTTGCCAAAAAGTGGTCACTTTTGTGATGAAGGTGTAATTGAAGATGCTATAGAGTCTTCCTCAGTGATACCTAGAGATAATGCAGATATAGCTTCTGTTTTGTCATCAAATGTGGAGCGACTGGAACAGCTGGAATCATTGCTGTTATTTTGGGAGAACATTGCTCATGATTTTGGGGATTCCTTTGTTCATAGCCACTCAAATATGGATCTTGATGAATCTACAAGTTGTGTTGATAGTCCTGCTCTCTCTTGTATGCAACTTGATAACGAACTTCACCCTATATCATCTGGAATTGACATGAACTGTGAACCAGCTGGAGCTACTGTTTCTGATCCTAGTTCATCAAAAGAAAAACCTGTGGGAACAACCACTGTAGCTGCTGGCGTCAATGATGTATTCTGGGAACAGTTCTTGACGGAGAATCCTGGTTCTTCAGAAAGACAGGAAGTACAGTCAGAGCGAAAGGATCCTGATAGCAGAAAGAATGAAGGAAAACCTAGTGACAGAAGTAAACTTTGGTGGAACAATGTAAATAGACTTTCAGAACAGATGGGGCATCTTAGCCAAACAGAAAAAACTTAA 1209 0.4012 MDEAQGSSSTLPPFLTKTYEMVDDPSTDSIVSWSATNKSFIVWNPPEFASELLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANDDFIRGQQHLLKNIHRRKPVHSHSLQNIQGQGASPLTEPERQSLRGKIERLKHENEQLCLELERHEQEWRVNEIKIGCSKERLEKLERKKQKMVSSVSQALQKPEIASNLLQLSETLYRKRRLPKSGHFCDEGVIEDAIESSSVIPRDNADIASVLSSNVERLEQLESLLLFWENIAHDFGDSFVHSHSNMDLDESTSCVDSPALSCMQLDNELHPISSGIDMNCEPAGATVSDPSSSKEKPVGTTTVAAGVNDVFWEQFLTENPGSSERQEVQSERKDPDSRKNEGKPSDRSKLWWNNVNRLSEQMGHLSQTEKT 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00071 402 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4774g00071 402 MobiDBLite consensus disorder prediction 348 402 - -
Pral4774g00071 402 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4774g00071 402 SUPERFAMILY "Winged helix" DNA-binding domain 10 103 IPR036390 -
Pral4774g00071 402 MobiDBLite consensus disorder prediction 312 331 - -
Pral4774g00071 402 MobiDBLite consensus disorder prediction 316 330 - -
Pral4774g00071 402 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4774g00071 402 MobiDBLite consensus disorder prediction 356 377 - -
Pral4774g00071 402 Coils Coil 127 154 - -
Pral4774g00071 402 Gene3D - 6 104 IPR036388 -
Pral4774g00071 402 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 243 IPR027725 -
Pral4774g00071 402 MobiDBLite consensus disorder prediction 378 402 - -
Pral4774g00071 402 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4774g00071 402 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4774g00071 402 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral4774g00071 402 FunFam Heat shock transcription factor 1 7 104 - -
Pral4774g00071 402 Coils Coil 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00071 Pral-Chr4774 348316 350550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00071 7 402 HSF AT4G18880 52.709 1.33e-122 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pral4774g00071 HSF_DNA-bind 3.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00071 K09419 - gmx:100798004 583.563