Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00048 ATGGAATATGTGAGAAGGGTTGTTTGTTTCGTCTTCTTTCTGTGGAATTGGTTGGCTGCTGCTGGTAACACTGACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTTGCTGCTTTGATGTCAATGAAGAATAAAATGAAAGACGAATTGCGTGTTATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGCTATGTTATTTCCCTGGACATGGCCAGTATGAGTTTATCCGGAACGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTGTTGCAGAACAATCAATTGTCTGGACCTGTTCCTGCTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTTTCTGGTAACCAGTTTGTTGGTGAAATCCCAAGTTCTCTGGGCTTTTTGACTCGTCTTAGTTACTTGCGGCTCAGTAGAAATAAACTATCTGGGCAGATTCCTCAAGACGTTGCAAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCGTTCCAAAAATTTTAGCAAAAGGTTACAGTATTTCAGGAAACAACTTCCTTTGTGCATCTTCATCGGCACAAACTTGTATGGGTGTTTCGAATCAACTAAACGAAACTGGTTCGTCCCTGGAAGTTGGTAGTCATCACCATCGAGTGCTTTCTGTTGCTATTGGCATTAGTTGTACATTTCTAATTTCAGTAATGCTGCTTATCTGCTGTGTCCATTGGTACAGATCGCGCATCCTGTATACATCTTATGTAAAGGAAGATTATGAATTTGACATTGGTCATTTGAGGAGGTTTTCCTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCAAAAAATATCTTAGGACAGGGTGGATTTGGTGTTGTCTACAAAGGATGTCTTCCAAATAAAATGACAGTGGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTGCATCGGAATCTCTTACGTCTCTATGGATTTTGTATGACATCTGATGAGAGGCTGCTTGTTTACCCATACATGCCTAATGGCAGTGTTGCCGATCGCTTGAGAGACACTTGCCGCGAAAAGCCATCATTGGACTGGAATAGGCGAATGCGTATTGCGCTGGGGGCAGCTCGTGGGCTTCTATATTTACATGAGCAGTGTAACCCAAAAATTATCCACAGGGACGTGAAGGCTGCAAACATTTTGCTTGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTTGCCAAGCTCTTGGATCAAAGAGATTCGCACGTCACTACTGCAGTGCGAGGCACAGTAGGACATATTGCCCCTGAATATCTCTCCACTGGGCAGTCTTCTGAAAAAACTGATGTTTTCGGATTTGGCATATTACTTTTGGAGCTCATTACAGGGCAGAAGGCTTTAGATGCTGGAAATGGTCAAATCCAGAAGGGAATGATTCTTGATTGGGTCAAAACCTTATTTGAGGAGAAGCGACTAGAAATGCTAGTTGATAGGGATCTGAGGGGACGTTTTGATCCAATAGAATTGGAACAAGCAGTGAAGTTGTCTCTACAATGTACTCAATCACATCCCAGCCTCCGGCCAAAGATGTCAGAAATCTTGAGGATCCTGGAAGGCCTAGTTGGACAGGGGCAACCGGAGGAGGAGTCACCCGGTGGAGGTACCCTTTATGACGAAAGGAATTGCAGTTTCTCCAGAAATTACAGTGACGGCCATGATGAACCTTCATTTATCATTGAGGCCATTGAGCTTTCTGGACCTCGGTGA 1863 0.4375 MEYVRRVVCFVFFLWNWLAAAGNTDSLLSPKGVNYEVAALMSMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVISLDMASMSLSGTLSPGIGNLSHLRTLLLQNNQLSGPVPAEIGKLLELQTLDLSGNQFVGEIPSSLGFLTRLSYLRLSRNKLSGQIPQDVANLTGLSFLDLSFNNLSGPVPKILAKGYSISGNNFLCASSSAQTCMGVSNQLNETGSSLEVGSHHHRVLSVAIGISCTFLISVMLLICCVHWYRSRILYTSYVKEDYEFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGCLPNKMTVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRIALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQIQKGMILDWVKTLFEEKRLEMLVDRDLRGRFDPIELEQAVKLSLQCTQSHPSLRPKMSEILRILEGLVGQGQPEEESPGGGTLYDERNCSFSRNYSDGHDEPSFIIEAIELSGPR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00048 620 FunFam Somatic embryogenesis receptor kinase 1 267 372 - -
Pral4774g00048 620 Pfam Protein kinase domain 300 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00048 620 SUPERFAMILY Protein kinase-like (PK-like) 281 571 IPR011009 -
Pral4774g00048 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Pral4774g00048 620 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Pral4774g00048 620 Pfam Leucine Rich Repeat 126 147 IPR001611 GO:0005515
Pral4774g00048 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 568 - -
Pral4774g00048 620 SUPERFAMILY L domain-like 35 205 - -
Pral4774g00048 620 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Pral4774g00048 620 Gene3D Phosphorylase Kinase; domain 1 267 372 - -
Pral4774g00048 620 FunFam Somatic embryogenesis receptor-like kinase 1 373 581 - -
Pral4774g00048 620 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Pral4774g00048 620 ProSiteProfiles Protein kinase domain profile. 297 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00048 620 Gene3D Transferase(Phosphotransferase) domain 1 373 576 - -
Pral4774g00048 620 FunFam Putative LRR receptor-like serine/threonine-protein kinase 33 215 - -
Pral4774g00048 620 SMART serkin_6 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00048 Pral-Chr4774 207427 212246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00048 41 620 Receptor kinase-like Gene Family AT5G45780 72.806 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral4774g00048 Pkinase 9.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00048 - - gmx:100810610 1034.63