Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00047 ATGGAATATGTGAGAAGGGTTGTTTGTTTCGTCTTCTTTCTGTGGAATTGGTTGGCTGCTGCTGGTAACACTGACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTTGCTGCTTTGATGTCAATGAAGAATAAAATGAAAGACGAATTGCGTGTTATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGCTATGTTATTTCCCTGGACATGGCCAGTATGAGTTTATCCGGAACGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTGTTGCAGAACAATCAATTGTCTGGACCTGTTCCTGCTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTTTCTGGTAACCAGTTTGTTGGTGAAATCCCAAGTTCTCTGGGCTTTTTGACTCGTCTTAGTTACTTGCGGCTCAGTAGAAATAAACTATCTGGGCAGATTCCTCAAGACGTTGCAAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCGTTCCAAAAATTTTAGCAAAAGGTTACAGTATTTCAGGAAACAACTTCCTTTGTGCATCTTCATCGGCACAAACTTGTATGGGTGTTTCGAATCAACTAAACGGTAATATATATTTCACCCATGTCAGATCAAACTCAAAATATCTGTTGATTGGATTACACACATATATATATGACAGTTTAATTGCAGAAACTGGTTCGTCCCTGGAAGTTGGTAGTCATCACCATCGAGTGCTTTCTGTTGCTATTGGCATTAGTTGTACATTTCTAATTTCAGTAATGCTGCTTATCTGCTGTGTCCATTGGTACAGATCGCGCATCCTGTATACATCTTATGTAAAGGAAGATTATGAATTTGACATTGGTCATTTGAGGAGGTTTTCCTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCAAAAAATATCTTAGGACAGGGTGGATTTGGTGTTGTCTACAAAGGATGTCTTCCAAATAAAATGACAGTGGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTGCATCGGAATCTCTTACGTCTCTATGGATTTTGTATGACATCTGATGAGAGGCTGCTTGTTTACCCATACATGCCTAATGGCAGTGTTGCCGATCGCTTGAGAGACACTTGCCGCGAAAAGCCATCATTGGACTGGAATAGGCGAATGCGTATTGCGCTGGGGGCAGCTCGTGGGCTTCTATATTTACATGAGCAGTGTAACCCAAAAATTATCCACAGGGACGTGAAGGCTGCAAACATTTTGCTTGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTTGCCAAGCTCTTGGATCAAAGAGATTCGCACGTCACTACTGCAGTGCGAGGCACAGTAGGACATATTGCCCCTGAATATCTCTCCACTGGGCAGTCTTCTGAAAAAACTGATGTTTTCGGATTTGGCATATTACTTTTGGAGCTCATTACAGGGCAGAAGGCTTTAGATGCTGGAAATGGTCAAATCCAGAAGGGAATGATTCTTGATTGGGTCAAAACCTTATTTGAGGAGAAGCGACTAGAAATGCTAGTTGATAGGGATCTGAGGGGACGTTTTGATCCAATAGAATTGGAACAAGCAGTGAAGTTGTCTCTACAATGTACTCAATCACATCCCAGCCTCCGGCCAAAGATGTCAGAAATCTTGAGGATCCTGGAAGGCCTAGTTGGACAGGGGCAACCGGAGGAGGAGTCACCCGGTGGAGGTACCCTTTATGACGAAAGGAATTGCAGTTTCTCCAGAAATTACAGTGACGGCCATGATGAACCTTCATTTATCATTGAGGCCATTGAGCTTTCTGGACCTCGGTGA 1950 0.4308 MEYVRRVVCFVFFLWNWLAAAGNTDSLLSPKGVNYEVAALMSMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVISLDMASMSLSGTLSPGIGNLSHLRTLLLQNNQLSGPVPAEIGKLLELQTLDLSGNQFVGEIPSSLGFLTRLSYLRLSRNKLSGQIPQDVANLTGLSFLDLSFNNLSGPVPKILAKGYSISGNNFLCASSSAQTCMGVSNQLNGNIYFTHVRSNSKYLLIGLHTYIYDSLIAETGSSLEVGSHHHRVLSVAIGISCTFLISVMLLICCVHWYRSRILYTSYVKEDYEFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGCLPNKMTVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRIALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQIQKGMILDWVKTLFEEKRLEMLVDRDLRGRFDPIELEQAVKLSLQCTQSHPSLRPKMSEILRILEGLVGQGQPEEESPGGGTLYDERNCSFSRNYSDGHDEPSFIIEAIELSGPR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00047 649 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Pral4774g00047 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral4774g00047 649 Gene3D Transferase(Phosphotransferase) domain 1 402 605 - -
Pral4774g00047 649 FunFam Somatic embryogenesis receptor kinase 1 296 401 - -
Pral4774g00047 649 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Pral4774g00047 649 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Pral4774g00047 649 Gene3D Phosphorylase Kinase; domain 1 296 401 - -
Pral4774g00047 649 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 597 - -
Pral4774g00047 649 FunFam Putative LRR receptor-like serine/threonine-protein kinase 33 215 - -
Pral4774g00047 649 SUPERFAMILY L domain-like 35 205 - -
Pral4774g00047 649 Pfam Leucine Rich Repeat 126 147 IPR001611 GO:0005515
Pral4774g00047 649 SMART serkin_6 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00047 649 Pfam Protein kinase domain 329 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00047 649 FunFam Somatic embryogenesis receptor-like kinase 1 402 610 - -
Pral4774g00047 649 ProSiteProfiles Protein kinase domain profile. 326 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00047 649 SUPERFAMILY Protein kinase-like (PK-like) 310 600 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00047 Pral-Chr4774 207427 212741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00047 41 649 Receptor kinase-like Gene Family AT5G45780 69.672 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral4774g00047 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00047 - - gmx:100810610 1019.22