Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00046 ATGGAATATGTGAGAAGGGTTGTTTGTTTCGTCTTCTTTCTGTGGAATTGGTTGGCTGCTGCTGGTAACACTGACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTTGCTGCTTTGATGTCAATGAAGAATAAAATGAAAGACGAATTGCGTGTTATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGCTATGTTATTTCCCTGGACATGGCCAGTATGAGTTTATCCGGAACGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTGTTGCAGAACAATCAATTGTCTGGACCTGTTCCTGCTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTTTCTGGTAACCAGTTTGTTGGTGAAATCCCAAGTTCTCTGGGCTTTTTGACTCGTCTTAGTTACTTGCGGCTCAGTAGAAATAAACTATCTGGGCAGATTCCTCAAGACGTTGCAAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCGTTCCAAAAATTTTAGCAAAAGGTTACAGTATTTCAGGAAACAACTTCCTTTGTGCATCTTCATCGGCACAAACTTGTATGGGTGTTTCGAATCAACTAAACGGTAATATATATTTCACCCATGTCAGATCAAACTCAAAATATCTGTTGATTGGATTACACACATATATATATGACAGTTTAATTGCAGAAACTGGTTCGTCCCTGGAAGTTGGTAGTCATCACCATCGAGTGCTTTCTGTTGCTATTGGCATTAGTTGTACATTTCTAATTTCAGTAATGCTGCTTATCTGCTGTGTCCATTGGTACAGATCGCGCATCCTGTATACATCTTATGTAAAGGAAGATTATGAATTTGACATTGGTCATTTGAGGAGGTTTTCCTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCAAAAAATATCTTAGGACAGGGTGGATTTGGTGTTGTCTACAAAGGATGTCTTCCAAATAAAATGACAGTGGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTGCATCGGAATCTCTTACGTCTCTATGGATTTTGTATGACATCTGATGAGAGGCTGCTTGTTTACCCATACATGCCTAATGGCAGTGTTGCCGATCGCTTGAGAGACACTTGCCGCGAAAAGCCATCATTGGACTGGAATAGGCGAATGCGTATTGCGCTGGGGGCAGCTCGTGGGCTTCTATATTTACATGAGCAGTGTAACCCAAAAATTATCCACAGGGACGTGAAGGCTGCAAACATTTTGCTTGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTTGCCAAGCTCTTGGATCAAAGAGATTCGCACGTCACTACTGCAGTGCGAGGCACAGTAGGACATATTGCCCCTGAATATCTCTCCACTGGGCAGTCTTCTGAAAAAACTGATGTTTTCGGATTTGGCATATTACTTTTGGAGCTCATTACAGGGCAGAAGGCTTTAGATGCTGGAAATGGTCAAATCCAGAAGGGAATGATTCTTGATTGGGTAATTTGCTTCAGTTTTGTCTGTCAAAACCTTATTTGA 1668 0.4203 MEYVRRVVCFVFFLWNWLAAAGNTDSLLSPKGVNYEVAALMSMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVISLDMASMSLSGTLSPGIGNLSHLRTLLLQNNQLSGPVPAEIGKLLELQTLDLSGNQFVGEIPSSLGFLTRLSYLRLSRNKLSGQIPQDVANLTGLSFLDLSFNNLSGPVPKILAKGYSISGNNFLCASSSAQTCMGVSNQLNGNIYFTHVRSNSKYLLIGLHTYIYDSLIAETGSSLEVGSHHHRVLSVAIGISCTFLISVMLLICCVHWYRSRILYTSYVKEDYEFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGCLPNKMTVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRIALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQIQKGMILDWVICFSFVCQNLI 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00046 555 Gene3D Phosphorylase Kinase; domain 1 296 401 - -
Pral4774g00046 555 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Pral4774g00046 555 SUPERFAMILY L domain-like 35 205 - -
Pral4774g00046 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral4774g00046 555 SUPERFAMILY Protein kinase-like (PK-like) 308 547 IPR011009 -
Pral4774g00046 555 FunFam Somatic embryogenesis receptor-like kinase 1 402 548 - -
Pral4774g00046 555 SMART serkin_6 326 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00046 555 Pfam Leucine Rich Repeat 126 147 IPR001611 GO:0005515
Pral4774g00046 555 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Pral4774g00046 555 Gene3D Transferase(Phosphotransferase) domain 1 402 548 - -
Pral4774g00046 555 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 532 - -
Pral4774g00046 555 Pfam Protein kinase domain 329 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00046 555 FunFam Somatic embryogenesis receptor kinase 1 296 401 - -
Pral4774g00046 555 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Pral4774g00046 555 FunFam Putative LRR receptor-like serine/threonine-protein kinase 33 215 - -
Pral4774g00046 555 ProSiteProfiles Protein kinase domain profile. 326 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00046 Pral-Chr4774 207426 212027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00046 41 544 Receptor kinase-like Gene Family AT5G45780 72.079 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral4774g00046 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00046 - - qsa:O6P43_012793 867.84