Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00037 ATGGGAGGTAAGGTTATGAGCTCCAATTTTTGTAGATTTTGGATTCTTCTGGCGTTGTTTGCTGTGGTGGATTCTTCCTGCAACAGCACCGACTACGAGTTGGTCTCCAAAGCCTTTCAATCTGTCGCTGGCTTTAATGTTTCCTGGTTCCATACGCAAGGTTTAAACTGTTCAAAAGCTTCTCAGATTACTTCCATACAGCTTGCTTCCAAGAATCTGAGGGGGGTTATTTCTTGGGCTTTCATCAGGAATATGTCTGACTTGCACGTTCTCGATCTTTCTGGGAATTTTCTCCAAGGCCATGTACCTCGCTGGTTTTGGACATCTCCCAACTTATCAAAAGTTGATCTTTCTAATAACAAGTTTGGAGGGAGCATTGAGCTCGAATCCCCCGCAGGAAACTCCCCGTTTTCATCGGTTCAGAGTCTCAATCTCTCTCACAACAGCTTCACCAATCTGCCTCAACTCTCTGGTTTCTCAAACCTCAGAATTCTCGACCTCTCGCATAACAATTTGAGGACTCTGCCCACTGGGTTTCGAAACCTCACCGGGCTACACCATCTCGACCTCTCAAGCTGCAATATCAAAGCAAACGTAAAAACCATTTCTGTTCTGCGCTCGCTGAATCACTTGGACTTGTCGAACAACACTTTCAATGGCAATTTCCCTTCTGATTTCCCTCCTCTGGAGGAGCTCAAGTTCTTAAACATTTCTTACAACAACTTCACGGCACTGGTTCACTTGGACAAGTACAAGAAATTTGGCAACTCAGCTTTCATTGACGCCGGAAACAACTTCGCTCACAATACATCTAGTACCCCCAGTCTTGATCCGCCTTCTCATCATGCTTTAAAAGCCTCGACGAACCACCACAAACACAAAACTCTGGTGGCGGCTGTATGCTCTGCTTCAGCATTTGTGCTGGTTCTATTTAGTATATGGGCGTTTTGCATTTACAGAAAGAAGAGGCGACTGGCGAAGAAGAGGAAATGGGCAATCTCGAAGCCAGTGCCTCAGGGAATAAAGGTGGACAAATCGGGGCCTTTCGCATTCGAAACCGAGTCAGGAAGCTCGTGGGTAGCGGATTTGAAGGAGCCATCGTCGGCACCCGTGGTGATGTTCGAAAAGCCGTTGATGAACCTTAGCTTCAAGGACCTGATAGCTGCCACGTCACACTTCGGCAAAGAGTCGATGCTGGCGGAGGGAAGGTGCGGGCCCGTGTACAGAGCCGTCGTCATTCCCGGCGACATCCACGTGGCGATCAAAGTTCTGGAGAATGCAAGAGACGTCCATAGCGATGACGCCATCGCGCTGTTCGTTGACCTGTCTAAGCTCAAACACCCCAATTTATTGCCACCATCCGGATACTGCATTGCAGGTAGCGAGAAGCTGATTTTGTACGAGTTTATGTCAAACGGCGATTTGGGTAGGTGGCTGCATGAGCTGCCAACGGGGCAAACCGACGTGGAGGATTGGACCGGTGACACGTGGGAGATTCAGAACGGCTCCGGATCGCAGGTCTCATCCCCACCGGAGAAGATGAACTGGCTGACACGACACCGTATTTCCGTCGGGATTGCTCGGGGGCTAGCGTATCTTCACCACGCGGGGTCAAAGCCCGTCGTCCACGGCCACCTAGTGACTTCAAACATCTTGCTCGGCGACGACTTGGAGCCCCGGATCGCCGATTTTGGGATCCAAAGCATCGGGAAGGAGCAGCAGAGCCCGACCTGCAGCACAGAGACGGACGTTTACTGCTTCGGGGTGGTGCTGATGGAGCTGTTAACAGGGAAGCCCGGCACGGCGGAGACGGTGGTCCGGGTGAGAAAGGCGGTGAGGGAGGGGCAGGGGGAGCGCGCGTTGGATGAGAGGCTGAGACTGAGCTGCGAGCGGGAAAACGAGATGCTGGAGAGCCTGCGAGTCGCGTACTTGTGTACGGCCGAGTCGCCCGGCAAAAGGCCCACCATGCAACAGGTTCTGGGTTTGCTCAAAGACGTTCACCCACACGCCCCGAGTTGA 2019 0.5191 MGGKVMSSNFCRFWILLALFAVVDSSCNSTDYELVSKAFQSVAGFNVSWFHTQGLNCSKASQITSIQLASKNLRGVISWAFIRNMSDLHVLDLSGNFLQGHVPRWFWTSPNLSKVDLSNNKFGGSIELESPAGNSPFSSVQSLNLSHNSFTNLPQLSGFSNLRILDLSHNNLRTLPTGFRNLTGLHHLDLSSCNIKANVKTISVLRSLNHLDLSNNTFNGNFPSDFPPLEELKFLNISYNNFTALVHLDKYKKFGNSAFIDAGNNFAHNTSSTPSLDPPSHHALKASTNHHKHKTLVAAVCSASAFVLVLFSIWAFCIYRKKRRLAKKRKWAISKPVPQGIKVDKSGPFAFETESGSSWVADLKEPSSAPVVMFEKPLMNLSFKDLIAATSHFGKESMLAEGRCGPVYRAVVIPGDIHVAIKVLENARDVHSDDAIALFVDLSKLKHPNLLPPSGYCIAGSEKLILYEFMSNGDLGRWLHELPTGQTDVEDWTGDTWEIQNGSGSQVSSPPEKMNWLTRHRISVGIARGLAYLHHAGSKPVVHGHLVTSNILLGDDLEPRIADFGIQSIGKEQQSPTCSTETDVYCFGVVLMELLTGKPGTAETVVRVRKAVREGQGERALDERLRLSCERENEMLESLRVAYLCTAESPGKRPTMQQVLGLLKDVHPHAPS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00037 672 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Pral4774g00037 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 46 664 - -
Pral4774g00037 672 Pfam Protein tyrosine and serine/threonine kinase 396 570 IPR001245 GO:0004672|GO:0006468
Pral4774g00037 672 Pfam Leucine rich repeat 62 122 IPR001611 GO:0005515
Pral4774g00037 672 Pfam Leucine rich repeat 139 195 IPR001611 GO:0005515
Pral4774g00037 672 SMART LRR_typ_2 159 181 IPR003591 -
Pral4774g00037 672 SMART LRR_typ_2 85 109 IPR003591 -
Pral4774g00037 672 SMART LRR_typ_2 137 158 IPR003591 -
Pral4774g00037 672 FunFam Putative LRR receptor-like serine/threonine-protein kinase 354 469 - -
Pral4774g00037 672 SUPERFAMILY L domain-like 45 245 - -
Pral4774g00037 672 SUPERFAMILY Protein kinase-like (PK-like) 383 664 IPR011009 -
Pral4774g00037 672 Gene3D Ribonuclease Inhibitor 130 303 IPR032675 -
Pral4774g00037 672 Gene3D Transferase(Phosphotransferase) domain 1 577 667 - -
Pral4774g00037 672 ProSiteProfiles Leucine-rich repeat profile. 139 160 IPR001611 GO:0005515
Pral4774g00037 672 Gene3D Transferase(Phosphotransferase) domain 1 470 576 - -
Pral4774g00037 672 Gene3D Ribonuclease Inhibitor 35 129 IPR032675 -
Pral4774g00037 672 SMART LRR_bac_2 137 156 - -
Pral4774g00037 672 SMART LRR_bac_2 229 248 - -
Pral4774g00037 672 SMART LRR_bac_2 159 178 - -
Pral4774g00037 672 ProSiteProfiles Protein kinase domain profile. 393 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00037 672 Gene3D Phosphorylase Kinase; domain 1 353 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00037 Pral-Chr4774 169289 173159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00037 63 666 Receptor kinase-like Gene Family AT5G07280 30.475 5.89e-71 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pral4774g00037 PK_Tyr_Ser-Thr 5.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00037 - - gmx:100778920 908.286