Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00036 ATGTATCGATCAGTCCCACCTTTGACAGCCATCGACAGATTCCTGTGGGGCCAGCAGGCACAGAATCACAAGACTAGTACTATGTGGCGTAACACTGGAGGATCAAGTTTCATCGATGGATTTGTGTTACCAAATGAGCAGGCTTTGAACTGGACACACGCTCAGGTCCCTGCATTGTGCTTCACAAACAGAGTTTCAGGGAAGCACGACGACGACGATACTGTGGGAAGGAGAATTAGTAGGAAACGATCTCGCGTATCTTTGATCAAAGGACAGTGGACGGATGAAGAAGACAGGAAATTGGTGAGACTGGTGAATCAGTATGGTGTGAAAAAATGGGCTGAAATAGCAGAGAAATTGGATGGAAGAGCGGGTAAGCAGTGTCGAGAGAGATGGCATAATCATTTGCGCCCTGATATTAAGAAAGACAGTTGGAGCGAAGAAGAAGAGAAGATATTGGTGGAAACACATGCCAAGTTGGGGAATCGTTGGGCAGAAATAGCAAAGAGCATTCCGGGAAGAACAGAGAATGCGATCAAGAACCACTGGAATGCTACTAAAAGAAGGCAGAATTCAAAGAGAAAGAAGAAAATCACACACACAACACACAAAAAGCCACGTTCCTCTATACTTGAGGACTATATCAGAAGCAAGACCCTGATAAGTAATAACACTGTCCAGAACAACATTGAAGAAAACCAATCTGAACCCCCTTCTGATCAGTCTGCTGTTGTTAATGGCGACTCTATAATATCTGAACCGTATGATGAGGAATTGCTCTTCTTGCAAGGTTTTCTTGCCGACAATCAGAATCAGAAACAGTATCTTGCTGATGTTGAGCACTCTCAGAATTCTTCTTCAACTTCCTACTTGTTGGACTTTTGTCAAGCTGATGGTGAACAGCGTCTTATCACTGATGTGACTGCTGGGCCTGGATTTGTGTATTCCATTTCAAACCCATATAGCAAAACAAGCTTCTATGAGAATGTCCTCGCTGAGGAGGCTGTCACTCCCATGAAACACTCCCAATCAGATCTTTATCTCTCTTACTTGCTCAATGGACCACCCTCCTCACCACTTCTGTGCGGGCATGGAAATCAAAACCTGAACATGAATTTGCTTGTGGGGTATCAGCCGGAGATGGATTTATTGGAATTGGTTTCTTCTAAGTTTTCTACAATCACCAACAGTGGCATTTGA 1200 0.4392 MYRSVPPLTAIDRFLWGQQAQNHKTSTMWRNTGGSSFIDGFVLPNEQALNWTHAQVPALCFTNRVSGKHDDDDTVGRRISRKRSRVSLIKGQWTDEEDRKLVRLVNQYGVKKWAEIAEKLDGRAGKQCRERWHNHLRPDIKKDSWSEEEEKILVETHAKLGNRWAEIAKSIPGRTENAIKNHWNATKRRQNSKRKKKITHTTHKKPRSSILEDYIRSKTLISNNTVQNNIEENQSEPPSDQSAVVNGDSIISEPYDEELLFLQGFLADNQNQKQYLADVEHSQNSSSTSYLLDFCQADGEQRLITDVTAGPGFVYSISNPYSKTSFYENVLAEEAVTPMKHSQSDLYLSYLLNGPPSSPLLCGHGNQNLNMNLLVGYQPEMDLLELVSSKFSTITNSGI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00036 399 MobiDBLite consensus disorder prediction 187 204 - -
Pral4774g00036 399 Gene3D - 143 212 - -
Pral4774g00036 399 PANTHER MYB PROTEIN-RELATED 82 221 - -
Pral4774g00036 399 MobiDBLite consensus disorder prediction 187 207 - -
Pral4774g00036 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 191 IPR017930 -
Pral4774g00036 399 SMART sant 89 138 IPR001005 -
Pral4774g00036 399 SMART sant 141 189 IPR001005 -
Pral4774g00036 399 ProSiteProfiles Myb-like domain profile. 85 136 IPR001005 -
Pral4774g00036 399 SUPERFAMILY Homeodomain-like 87 183 IPR009057 -
Pral4774g00036 399 Gene3D - 89 141 - -
Pral4774g00036 399 CDD SANT 144 187 IPR001005 -
Pral4774g00036 399 Pfam Myb-like DNA-binding domain 93 151 - -
Pral4774g00036 399 ProSiteProfiles Myb-like domain profile. 137 187 IPR001005 -
Pral4774g00036 399 CDD SANT 93 136 IPR001005 -
Pral4774g00036 399 FunFam Transcriptional activator Myb isoform A 89 142 - -
Pral4774g00036 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 140 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00036 Pral-Chr4774 165266 167252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00036 1 358 MYB Transcription Factor Family AT5G58850 41.645 2.50e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4774g00036 Myb_DNA-bind_6 5.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00036 K09422 - qsu:111985900 315.079