LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4774g00035	ATGGCCGACGCTGTTTCCAGCAAGCCCTCCACCAGCGGCGCCAACAAGAAGGTCGGCGGTAATAGCCTCCTGTTGGGTCGCTTCGAAGTCGGCAAGCTTCTTGGTCATGGCACGTTCGCCAAGGTCTACCATGCTCGCAATGTAAAAACCGGCGAAGGGGTCGCCATCAAGGTTATTGACAAGGAGAAAATCCTCAAGAGCGGCCTCGTCGCTCACATCAAGCGCGAGATCTCCATCCTCCGACGAGTCCGACACCCCAACATCGTTCAGCTGTTCGAGGTCATGGCCACCAAGGCCAAAATCTATTTCGTGATGGAATATGTTCGTGGGGGTGAGCTATTCAATAAAGTAGCTAAAGGGCGATTGAGAGAGGAAAGTGCCAGGAAGTACTTTCAGCAATTGATCTCCGCTGTCGGTTTCTGCCACGCGAGAGGGGTATATCATCGGGATCTCAAGCCTGAAAACTTGTTGCTCGACGAGAATGGGGATCTCAAGGTGTCTGATTTTGGATTGAGTGCTGTCTCTGATCAAATTCGGCAAGATGGGTTGTTCCACACATTTTGTGGGACTCCTGCTTACGTTGCCCCTGAGGTGTTGGCTAGAAAAGGTTATGATGGGGCAAAGGTTGATGTTTGGGCTTGTGGGGTTGTTCTGTTTGTTTTGATGGCTGGTTACTTGCCTTTCCATGATCAGAATATCATGGCAATGTACAAGAAGATTTACAGGGGTGAGTTCAGATGTCCCAAGTGGTTTACACCCGATCTCACTCGGCTGGTCACGCGTCTTCTTGATACCAACCCGCAAACCCGAATTTCAATTCCGGAGATCATGGAGAACCGGTGGTTCAAAAAAGGGTTTAAACAGATAAAGTTCTATGTGGAGGATGATAAGCTTTGTAATATTGATGATAAGATGGACAAGTTTGATGATATAGAATCAATGTCGGACTACTCCGTATCAGAATCTGATTCCGAGATAGAGACTAGAAGAAGAAATGCTTCACTTCCAAGACCCGCGAGCTTGAATGCATTTGACATAATATCATTTTCTCCGGGTTTTGATCTTTCTGGGTTGTTTGAGGAGAAGGGCGATGAGGCGAGGTTTGTGTCTGGTGCACCAGTGTCAAAGATTATATCAAAATTGGAGGAAATTGCCAGACTGGTCAGCTTCACTGTGAGGAAGAAAGATTGCAGAGTAAACTTGGAGGGTTCGAGAGAAGGCGCAAAAGGGCCATTGACAATTGCTGCAGAGATATTTGAATTAACACCTTCTTTGGTGGTGTTGGAGGTCAAGAAAAAAGCAGGGGATAAAGCAGAGTATGACCAATTCTGTGACACTGAATTGAGACCGGGGTTGCAGAACTTGATGACTGAGCAACCTGCTACTTCTTCCCAAACGCCTGGTACAGATACTGAACCGCCTCAACTACCTATGGATATTGATCCTCCACATTACATACCTTCGGATACCGAATAG	1476	0.4715	MADAVSSKPSTSGANKKVGGNSLLLGRFEVGKLLGHGTFAKVYHARNVKTGEGVAIKVIDKEKILKSGLVAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLREESARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDVWACGVVLFVLMAGYLPFHDQNIMAMYKKIYRGEFRCPKWFTPDLTRLVTRLLDTNPQTRISIPEIMENRWFKKGFKQIKFYVEDDKLCNIDDKMDKFDDIESMSDYSVSESDSEIETRRRNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIARLVSFTVRKKDCRVNLEGSREGAKGPLTIAAEIFELTPSLVVLEVKKKAGDKAEYDQFCDTELRPGLQNLMTEQPATSSQTPGTDTEPPQLPMDIDPPHYIPSDTE	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4774g00035	491	Gene3D	Kinase associated domain 1, KA1	337	457	-	-
	Pral4774g00035	491	CDD	STKc_SnRK3	27	281	-	-
	Pral4774g00035	491	Pfam	Protein kinase domain	28	282	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4774g00035	491	FunFam	Non-specific serine/threonine protein kinase	20	107	-	-
	Pral4774g00035	491	ProSiteProfiles	Protein kinase domain profile.	28	282	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4774g00035	491	FunFam	Non-specific serine/threonine protein kinase	338	456	-	-
	Pral4774g00035	491	ProSiteProfiles	NAF domain profile.	336	360	IPR018451	GO:0007165
	Pral4774g00035	491	Gene3D	Transferase(Phosphotransferase) domain 1	20	336	-	-
	Pral4774g00035	491	ProSitePatterns	Protein kinases ATP-binding region signature.	34	57	IPR017441	GO:0005524
	Pral4774g00035	491	MobiDBLite	consensus disorder prediction	452	472	-	-
	Pral4774g00035	491	Pfam	NAF domain	338	394	IPR004041	GO:0007165
	Pral4774g00035	491	CDD	CIPK_C	342	453	-	-
	Pral4774g00035	491	MobiDBLite	consensus disorder prediction	451	491	-	-
	Pral4774g00035	491	FunFam	Non-specific serine/threonine protein kinase	18	330	-	-
	Pral4774g00035	491	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	22	452	-	-
	Pral4774g00035	491	SMART	serkin_6	28	282	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4774g00035	491	SUPERFAMILY	Protein kinase-like (PK-like)	24	283	IPR011009	-
	Pral4774g00035	491	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	146	158	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4774g00035	Pral-Chr4774	156950	158848	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4774g00035	1	491	CBL-interacting serine-threonine protein kinases	AT4G18700	74.699	0.0	756

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Pral4774g00035		Pkinase	1.7e-73	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4774g00035	-		-	gmx:100790133	794.267