Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00032 ATGGGTTCTAGATGTGGCTCATATGTATTATGGAGCAGAATTTACTCTGCTTTAATTTGTCTGTGGGGTATTCATGCATGTTGGTCGCTTAATGACGAAGTAATGGCTTTGTTAAAGTTCCGGGCTAGAATAGATTCTGATCCTCATGGAACTTTGGCTAACTGGAAACCAGATGATCTTGATCCTTGTGACTGGGTGGGTGTTCAATGTGTTGACACTAAAGTACAAATGCTGAACTTAAGTGGGCTATCTTTGGAAGGTACACTGGCTCCTGAGCTTGGGAAACTAAGTAACTTAAAATATCTGGTATTATGCAAGAATAACTTTTCTGGCACCGTTCCTAAAGAGCTTGGAGACCTAACTAAGCTGGAGCTGTTAGATTTGAGGGACAATAGCCTGACTGGAAGTGTTCCGGCAGAAATTAGCAAGATGTTGTTTCTAAAAGAGTTGTCCCTTTTTGGCAACAACATTGAAGTCACTGTTCCTCAAGATCTTGGGAAGGTGGAATTACTCTCTAAACCACAATTGGTCGACAATCATACATCTCATCAGACAGCTGAACTTGGTTGCATGAATAGAAAACTTGGACACTGCGTGTGGCAGAGCAATTTCAAAGAATGGAACATGAGACAATCGCTTGTCATTCCAATTAAAGGAGCAATTACAAAATGCCTCAATTCCTTGACGCTGCCATTGTTCAAGCTACAAAACTACCATAACTATGAAGAGAACTGCTTTGACAATCAGCCTAGTGAGTCAGCAGTTGCTCAAATACGTCGTAAATTACTTGATCAGTCCAGCAACCTTGCAGCGGCACCTTTTAGTGGTGGGTCTGCAAAACAGATCATTAGTCTCCCAACTACACTGAGTAGTGGAGCTTTTCCAGCCATATTAAATACCAGCAAGAATCAAAATCAGTCATCTGCGCCATTACCTTCTCCTGCTTCTTCTGGAAATGAAACAAATCAACAACCTTCAGCTGAAGATAAGGCATCTGGAGATGCTTGGAAATACATAATTATTATATCAGGTGTGCTTGTGTTGGTCATTGTTGCTGTTGCCATATTTTGCCTGTGGAATAAGAGAGCAGTAAAAGCAATTAGGCCATGGAAGACAGGATTAAGTGGACAGTTACAGAAGGCTTTTGTGACAGGTGTCCCTAAGTTAAATCGAGCAGAGTTGGAGGTGGCTTGTGAGGATTTCAGCAATATTGTTACAAGCTTGCCTAATTGCACCGTATACAAGGGAACCCTATCCAGTGGAGTCGAGATTGCTGTTTCTTCAGCTCTGATATCTTCTGCCCAAGACTGGTCAAAGAATATGGAGATTTCCTATCGAAAAAAGATTGATACCTTGTCTCGGGTAAACCATAAGAACTTTATCAATCTTATCGGCTACTGTGAGGAAGAAGAGCCATTTACTAGGATGATGGTAACTGAGTATGCTCCAAATGGATCCCTGTTTGAGCATTTGCATGTTGAGGGGCTTGAACACCTTGATTGGAACGCGAGGATGAGGGTTATTATGGGCGTGGCTTATTGTCTTCAGTACATGCACCATGACCTGAATCCACCAATAGCTCATAGCAACCTCGATTCACAATCAGTCTTGTTAACAGATGATTTTGCTGCAAAGGTTGCCCAGGTCATGTTTACCCCATCAACTGAGGATAAATCAAATTCAAAGAATTCTGAATTGTCATTCAACTCTGATCCTGAAACGAACGTTTATTGCTTCGGAAAATTGCTATTCGAAATCATTTCTGGGAAATTACCAGACTGTGAAGAACAAGGACAACTCGAGAAGTTGGCTGGTGAATTTTCAAATGGTAAGAGAAGCATCAGTTACATGATCGATCCTTCCCTTGAATCCTTCAAAGAGAAAGAACTTGATGTGGTTTGCGAGGTGATCCATCAATGCACCCAACCTAATCCAAGTTTGAGACCCACAATCAAGGATATAACCTCCAAATTAAGGGATGTTATTGGAATATCACCTGACCAAGCAGCCCCAAGACTTTCGCCGCTTTGGTGGGCCGAGCTAGAGATCTTGTCAGAGGAGGCAACATAA 2070 0.4188 MGSRCGSYVLWSRIYSALICLWGIHACWSLNDEVMALLKFRARIDSDPHGTLANWKPDDLDPCDWVGVQCVDTKVQMLNLSGLSLEGTLAPELGKLSNLKYLVLCKNNFSGTVPKELGDLTKLELLDLRDNSLTGSVPAEISKMLFLKELSLFGNNIEVTVPQDLGKVELLSKPQLVDNHTSHQTAELGCMNRKLGHCVWQSNFKEWNMRQSLVIPIKGAITKCLNSLTLPLFKLQNYHNYEENCFDNQPSESAVAQIRRKLLDQSSNLAAAPFSGGSAKQIISLPTTLSSGAFPAILNTSKNQNQSSAPLPSPASSGNETNQQPSAEDKASGDAWKYIIIISGVLVLVIVAVAIFCLWNKRAVKAIRPWKTGLSGQLQKAFVTGVPKLNRAELEVACEDFSNIVTSLPNCTVYKGTLSSGVEIAVSSALISSAQDWSKNMEISYRKKIDTLSRVNHKNFINLIGYCEEEEPFTRMMVTEYAPNGSLFEHLHVEGLEHLDWNARMRVIMGVAYCLQYMHHDLNPPIAHSNLDSQSVLLTDDFAAKVAQVMFTPSTEDKSNSKNSELSFNSDPETNVYCFGKLLFEIISGKLPDCEEQGQLEKLAGEFSNGKRSISYMIDPSLESFKEKELDVVCEVIHQCTQPNPSLRPTIKDITSKLRDVIGISPDQAAPRLSPLWWAELEILSEEAT 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00032 689 SUPERFAMILY L domain-like 27 195 - -
Pral4774g00032 689 FunFam Inactive receptor-like serine/threonine-protein kinase 373 481 - -
Pral4774g00032 689 Pfam Protein tyrosine and serine/threonine kinase 412 658 IPR001245 GO:0004672|GO:0006468
Pral4774g00032 689 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Pral4774g00032 689 SUPERFAMILY Protein kinase-like (PK-like) 411 657 IPR011009 -
Pral4774g00032 689 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pral4774g00032 689 Gene3D Phosphorylase Kinase; domain 1 371 481 - -
Pral4774g00032 689 MobiDBLite consensus disorder prediction 302 329 - -
Pral4774g00032 689 Gene3D Transferase(Phosphotransferase) domain 1 482 665 - -
Pral4774g00032 689 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Pral4774g00032 689 PANTHER PROTEIN MALE DISCOVERER 2 18 686 - -
Pral4774g00032 689 FunFam Leucine-rich repeat receptor-like protein kinase 30 185 - -
Pral4774g00032 689 ProSiteProfiles Protein kinase domain profile. 283 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00032 Pral-Chr4774 139805 146555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00032 52 669 Receptor kinase-like Gene Family AT5G56040 26.607 1.66e-42 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pral4774g00032 PK_Tyr_Ser-Thr 5.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00032 - - pcin:129306657 1213.75