Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4773g00012 ATGTCGTCTACTCCTTCATCTTCCTCTAATGGGGTACTCTCTTCCATAACACTTCATATCCTTGCTCGCATCAAAAGGTTTCTCAAACCCAAAGCGACCCGAGTAAGCTCTGATCCATCTGATCAACTCGAAATATCAATTACCAAATCCGAGAGCAACATCGACAAGGTTGAGAATTGTGAATCAGCGAGGCAAGCTATGGAGAAACAGAGTTGTGAGGAGGAACAGTCTGTGATATCGTTGAAGAGTTGCGTGAAGAAGCTTCACTTTGGGAGCTGGGAAGAGAAGGAGATGACGGCGAAAGAGATTGAACGCCTAGCCAAAGAAGATGTCAGGGTAAGAAAGCTGATAACGGAGCTAGGAGTGGTGCCGGAGCTGGTGTCAATGGTGGCGTCGGAGGTGGCTGGCCGGCAGCTAGCAGGGCTGAAGGCATTGGTCCAGCTCGCCCATGGAAGTTACAAAAACAAGGCTTTGATAGTGGAGGCAGGTATATTCTCCAAGCTGCCAAAGAGAGTTGACCTTGATGAATCAACAAGAAGGGAATGTGCAGAGCTGCTCTTATCATTGTCATCTCTAGCAAACAGCCAATTCCCTCTTGCTTCATTAGATTTTCTCCCATTCATTAAAGACATTCTGGAATCAGATCCAAATGTTGAAACCAAGCAATCATGCCTGGGTGCTTTGTGCAACCTCTCAACCGTGTTAGAGAATGTAGGGCCTTTAGTTTCAGCTGGGGTTGTGCCTATCCTCTTAGAACTGTCCTCTATCAAAGAAAATTCAGAGAAAGCACTTGCTACTTTGGGAAACTTGGTGGTGACCTTGATGGGAAAAAAGGCAATAGAAAATAGCTTAATGATGCCTGAGAGCTTGATAGAGATTTTGACATGGGAAGATAAACCAAAATGCCAGGAGTTGTCAGCTTACATTCTGATGATTCTAGCTCACCAGAGCTCATCACAAACACAGAAGATGGCACAAGCAGGGATTGTCCCTGTGCTACTTGAAGTAGCTCTGTTGGGAAGCCAATTAGCACAGAAGAGAGCACTAAAGCTACTGCAATGGTTCAAGGATGAGAGGCAATCAAAGATGGGGCCACATTCTGGGCCACAAACACCAAGAATGGCGATGGGCTCACCAGCAGACCACATAGAAGCAAAAGAGGGCAAGAGAATGATGAAGAGCTTGGTGAAACAGAGTTTGCATAGGAACATGGAAATTATTACTCAGAGAGCCAGCACCCCCGGGGATCCAACTAGGTTGAAATCATTGGTTATCAGCACAAGTTCCAAGAGTTTGCCTTATTAA 1305 0.4575 MSSTPSSSSNGVLSSITLHILARIKRFLKPKATRVSSDPSDQLEISITKSESNIDKVENCESARQAMEKQSCEEEQSVISLKSCVKKLHFGSWEEKEMTAKEIERLAKEDVRVRKLITELGVVPELVSMVASEVAGRQLAGLKALVQLAHGSYKNKALIVEAGIFSKLPKRVDLDESTRRECAELLLSLSSLANSQFPLASLDFLPFIKDILESDPNVETKQSCLGALCNLSTVLENVGPLVSAGVVPILLELSSIKENSEKALATLGNLVVTLMGKKAIENSLMMPESLIEILTWEDKPKCQELSAYILMILAHQSSSQTQKMAQAGIVPVLLEVALLGSQLAQKRALKLLQWFKDERQSKMGPHSGPQTPRMAMGSPADHIEAKEGKRMMKSLVKQSLHRNMEIITQRASTPGDPTRLKSLVISTSSKSLPY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4773g00012 434 Gene3D - 283 359 IPR011989 -
Pral4773g00012 434 Gene3D - 78 282 IPR011989 -
Pral4773g00012 434 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 434 - -
Pral4773g00012 434 SMART arm_5 234 272 IPR000225 GO:0005515
Pral4773g00012 434 SMART arm_5 152 191 IPR000225 GO:0005515
Pral4773g00012 434 SMART arm_5 192 233 IPR000225 GO:0005515
Pral4773g00012 434 SMART arm_5 110 150 IPR000225 GO:0005515
Pral4773g00012 434 SUPERFAMILY ARM repeat 81 355 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4773g00012 Pral-Chr4773 59429 63969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4773g00012 94 372 U-box Gene Family AT1G67530 31.469 2.00e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4773g00012 - - gmx:100813828 575.474