LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4767g00002	ATGCACCCTAAAGACCAAGAGTGTGTCACCTTTTTCTCCTTTTATCGTTTATCTTCTTCCATATCTAGTGCTTTTACTGTACTTATTGGAACATTTATTTCTGCTATCAATTTCTTTATTTATGAATTTCTGCTGACATTTTTCAGGTCTTTGCCAATGGCTACTAAATCTGTTGTAGACTTAATAGAGTCGTCCTCCGGGGTTCATTTTTCTGGATTTCATATGGATCCTTTAGAGAAAATAAATGCTGGAACAGAGCCTCCAACAACTTCTGTGGCTGACCACATGTATAATCAACCGTTTGTCATAGGTGTTGCTGGTGGAGCTGCAGCTGGGAAAACTGAAGTTTGTAATATGATTATTCAGCAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTCTATCATAATTTGACGGAGGAGGAACTCACTAGAGTACAAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGCAATTGCTTGAAGTTATGGACAAATTGAAGCATGGACAAGCTGTCGATATTCCAAATTATGACTTCAAGAGTTATAAAAGGGATGCTTTGCCCGCTAGACGGGTAAACCCTTCTGATGTAATCATTTTGGAAGGAATTCTTATTTTCCATGATCCTCGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGGCTGGCTAGGAGGATCAAGCGTGATACAGTTCAGAAGGGTCGGGATATTGGTGCTGTGCTTGATCAGTATTCTAAATTTGTAAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCCGATATCATTATTCCCCGTGGAGGAGACAATCATGTAGCAATTGATTTAATTGTACAGCATATCCGCACAAAACTTGGTCAGCATGATCTATGTAAAATATATCCTAACCTTTATGTTATTCAGTCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTGAAATAAAAACACATGATTTTGTATTTTATTCTGACCGTTTGATTCGTCTGGTTGTTGAACATGGCCTGGGACATTTACCATTTACAGAAAAACAAGTAATCACTCCGACTGGGTCTGTGTACACTGGTGTCGATTTCTGTAAGAGGTTATGTGGAGTCTCTGTGGTCAGGAGTGGGGAGAGTATGGAGAATGCCTTAAGAGCATGCTGTAAAGGTATCAAGATTGGCAAAATTCTTATTCATAGGGAAGGGGAAGGGGACAACAGTCAGCAGCTGATATATGAAAAATTGCCTAACGATATCTCTGATAGGCACGTGTTACTGTTGGATCCCATCCTAGGCACAGGAAATTCGGCTGTTCAAGCAATTTCTTTACTTATAAAAAAGGGTGTTCCAGAGTCCAACATTATATTTCTAAACCTCATATCGGCGCCCAAAGGTGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATAAAGATTGTGACATCTGAGATCGAGTTGGGCCTGAATAAAGACTTCCGTGTTGTACCGGGTATGGGCGAGTTTGGGGACCGGTATTTTGGCACAGATGATGATCAGCAAGTGGTGGTCCCTTCACAATAG	1599	0.4021	MHPKDQECVTFFSFYRLSSSISSAFTVLIGTFISAINFFIYEFLLTFFRSLPMATKSVVDLIESSSGVHFSGFHMDPLEKINAGTEPPTTSVADHMYNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRVVVVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEQLLEVMDKLKHGQAVDIPNYDFKSYKRDALPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIKRDTVQKGRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSEIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVVRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPKGVHVVCKAFPRIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDDDQQVVVPSQ	532

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4767g00002	532	FunFam	Uridine kinase	97	303	-	-
	Pral4767g00002	532	Pfam	Phosphoribulokinase / Uridine kinase family	102	288	IPR006083	GO:0005524\|GO:0016301
	Pral4767g00002	532	Gene3D	-	97	303	IPR027417	-
	Pral4767g00002	532	PANTHER	URIDINE KINASE	94	431	-	-
	Pral4767g00002	532	FunFam	Uridine kinase	304	521	-	-
	Pral4767g00002	532	PRINTS	Uridine kinase signature	232	242	-	-
	Pral4767g00002	532	PRINTS	Uridine kinase signature	246	257	-	-
	Pral4767g00002	532	PRINTS	Uridine kinase signature	130	141	-	-
	Pral4767g00002	532	PRINTS	Uridine kinase signature	268	281	-	-
	Pral4767g00002	532	PRINTS	Uridine kinase signature	100	117	-	-
	Pral4767g00002	532	PRINTS	Uridine kinase signature	175	190	-	-
	Pral4767g00002	532	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	94	293	IPR027417	-
	Pral4767g00002	532	Pfam	Uracil phosphoribosyltransferase	318	521	-	-
	Pral4767g00002	532	NCBIfam	uridine kinase	99	300	IPR000764	-
	Pral4767g00002	532	CDD	PRTases_typeI	377	494	IPR000836	-
	Pral4767g00002	532	SUPERFAMILY	PRTase-like	303	522	IPR029057	-
	Pral4767g00002	532	Gene3D	-	304	521	IPR029057	-
	Pral4767g00002	532	CDD	UMPK	113	300	IPR000764	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4767g00002	Pral-Chr4767	14343	21473	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4767g00002	53	524	PRT Gene Family	AT4G26510	81.818	0.0	796

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4767g00002	K00876		-	gmx:100798205	840.876