Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4763g00019 ATGGATCCATTTGATGATGTTTTGCCAGAAGCTCCTGTTTCACGTGGTAGGGTGGGTGGCAAGTTTGTTCCAAAGGCCAAAGCTAAACAGCTGGCTCGAAAGGAAATATCTACATCAAATCAAGCAAACTCATCTAATGATGGAAAGAATGAGCAAGTTGCATCATCATCCATGAGCTCGGACACAGTAGGAAATGTTCCAACAAAAAGTAATAATCCAGTTGATTTAACTCCAGATAAATCAGCTAAGGAATTTCTGAAATCCAGTCTTGGTTCACCGATAGAAACCCCTTTTTTGGATAATAATAATAATCCTGACCCAGAGTTTCAACAAATTGATGTAAGTGGGCGCGAGGCAGAACCGGTTGAAGCTCAGCCTTCAACCATTGCAGCATCTGAGGTCAATAGTGATTGGACTACCAATTTTCCAAAAGCAGCTAATGAGGCGGACCTTGTCAGTTTTGATGTGGGTCTAGTAGTTGCCGCTGTTCCTGGGTCTGACCTTCATGATGCCCAACCAGATCTGTTGACAAATGTGATCGATCCATCTACAGCTAACTCAACCATTATTGAGAATGAACCTTCTAAATACTGGGAAGGCGAAGGTCCATTTCTTGATGGCAGCAAAAGCTTGGAACCTACTGATTCCTCATTGCAAGCTGGTCCTAACGTGGAATCCCGAGGTGCTTCAGATTGTAAGGTTGCAATGTTGGAGCCAAGTCATTCAAATTCTAACCTTGAGAGAACAGGAGAGGTAGAGTCTTCTGAATTTGAATTGGATCCTTTCAGAGACACTCTCCCTGATCCTGGTCTTAGGAATGCTCGCAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGAGCAGGGACTACAGCAGTTGTTGCCTCTGCTTCATCTAATGACATCCTTAGGACAATCAATACATTAAGCGATGCTGATAATTCTTGCTCGAGTGTGCCATTGTCTGAGGACAAAAGAAGCTTGGGAACAGTAATTCCTTCACAATCAGAGCCTCCTCCTGCCTTGCTTTCAGAGGTTTCTGTTCACCATGGGCCTAAAGATTGGCCTTCTAACAGTGGAAAACCAGCGGGGGAGGCTACAGACATATTTTCTGTGTTGGAGAGCCTCGATGACTTTCTCACACATGATGGCTCTAGTGCAGGAAATCCAGCTCTTCATTCTTTCCATGAGGAGGGAACAGAGGATTTTGTGAACCAGCCATGTCATATTTCCCAAGCTCAAAAGTGTCCGGACTATAAGGCCACTCACGATTCATTGGCCTTCAAGGAAGCTGCAAGCCTCAGTGAGGGTGATTCTCACACTAACAATGGAGGGCTGGGAGCAGAGGATGCAGGAGGGTCAAATCCTACCCACCCTCTTGATGATACCCTTGATTATTCATCCATGAATTCTGGCTCAGATCCAACTTTTGAAATTCCAGTGCGTGAAGAACCACCTGAAGAACCAACAAATACAGCAAATAATCCTACCTATGATGACCTTTTGCATGTGGACGATGTTCCTGGAGAAAAAGTTGATGGAGGTTATAAAGCAGAAGATGCCACAATGTCAAGTTCTGCGAAAAATATTATGAAATCTTCTGTAGTAGGTGAGAAGGGTAAAGTTGATAAACCTCGAAGGCAGGTGAGAAAGCGAGTTAATCTTAAAACTGTTGATCCAGTGGAGAATGAGGATCCTGAGGAGGAGGATGAGCTTGACCCTACTTATTCTAACATTGGTGAACTTGAAGAACAACATGATGAATATGAATTGAATAATGGATGCGTGAAGAAAAAGAAGAAATCTGTGACCAAAAATGCAAAACCACATCAAAAGCGTAAAAGGGCCAATGAGGATTTAGATAAAGCTACTAAAGAACCTCGTAAAAAATTCTCTCATTCAACCCAACGAAGAAAAAGATGTGTGGATAAGACTCTGCTGGAAATTCCTGAGGATGAACTGGATCCTCAAACATTACGTATCAAGGATATTATACTACTTGCAGAGTATAGGGAGCGACAAGCGAAAAAGGAGGCAATGGCATCAAAAACATCTTCGATTAATGGAAGAGATGGAGACTCCCTTCATAATGCTGCTGCTCGTGATGAAGACATGGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCCACTGAAAGCGTACCATTAGCTCCCACGTTATTCAATTACCAGTCTTTCATGGACAAGAAACCTAGAGGAAAATGGTCAAAACAAGACACTGAGCTGTTCTATGAGGCCATTCGCCAGTTTGGCACAGATTTTTCTATGATACAACAGCTTTTCCCAGATCGAACACGTCATCAAATTAAGTTGAAGTACAAACAGGAAGAACGACAACATCCTTTACTACTATCTGATGCTGTAAATAATCGCACAAAAGATCTTTCTCATTATAAATCAGTTTTTGAGCGGCTGCAACGAGCTTCTGCTAAGACAGAACAAGACACTACGGACGCCTCAGTTGGCATGACAGAAGAAGTGGTGGACTTGACATCTGATCCTAATCCTAATGAAGCAAAAGATGCGAAGCCGGAGCAGGATGGCTCTGTGCAAGATCATCAGGAAGATAACGTGTCATATCATAGTGCTGAGAAATCTGATGAAATGATGATGATGAAGAATTCCAAAGAATGTGTCAATATAAAAGCGAATATTAGTGTTATGAGATCTTTTTTAAATTAA 2703 0.4236 MDPFDDVLPEAPVSRGRVGGKFVPKAKAKQLARKEISTSNQANSSNDGKNEQVASSSMSSDTVGNVPTKSNNPVDLTPDKSAKEFLKSSLGSPIETPFLDNNNNPDPEFQQIDVSGREAEPVEAQPSTIAASEVNSDWTTNFPKAANEADLVSFDVGLVVAAVPGSDLHDAQPDLLTNVIDPSTANSTIIENEPSKYWEGEGPFLDGSKSLEPTDSSLQAGPNVESRGASDCKVAMLEPSHSNSNLERTGEVESSEFELDPFRDTLPDPGLRNARKFQPKIKPRPRAGTTAVVASASSNDILRTINTLSDADNSCSSVPLSEDKRSLGTVIPSQSEPPPALLSEVSVHHGPKDWPSNSGKPAGEATDIFSVLESLDDFLTHDGSSAGNPALHSFHEEGTEDFVNQPCHISQAQKCPDYKATHDSLAFKEAASLSEGDSHTNNGGLGAEDAGGSNPTHPLDDTLDYSSMNSGSDPTFEIPVREEPPEEPTNTANNPTYDDLLHVDDVPGEKVDGGYKAEDATMSSSAKNIMKSSVVGEKGKVDKPRRQVRKRVNLKTVDPVENEDPEEEDELDPTYSNIGELEEQHDEYELNNGCVKKKKKSVTKNAKPHQKRKRANEDLDKATKEPRKKFSHSTQRRKRCVDKTLLEIPEDELDPQTLRIKDIILLAEYRERQAKKEAMASKTSSINGRDGDSLHNAAARDEDMGSEYGRGSDDDQATESVPLAPTLFNYQSFMDKKPRGKWSKQDTELFYEAIRQFGTDFSMIQQLFPDRTRHQIKLKYKQEERQHPLLLSDAVNNRTKDLSHYKSVFERLQRASAKTEQDTTDASVGMTEEVVDLTSDPNPNEAKDAKPEQDGSVQDHQEDNVSYHSAEKSDEMMMMKNSKECVNIKANISVMRSFLN 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4763g00019 900 MobiDBLite consensus disorder prediction 611 629 - -
Pral4763g00019 900 FunFam Predicted protein 742 819 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 196 228 - -
Pral4763g00019 900 Gene3D - 742 814 - -
Pral4763g00019 900 ProSiteProfiles SANT domain profile. 737 788 IPR017884 -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 502 516 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 459 474 - -
Pral4763g00019 900 SUPERFAMILY Homeodomain-like 740 788 IPR009057 -
Pral4763g00019 900 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 734 790 IPR017930 -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 329 362 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 251 265 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 674 696 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 815 872 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 210 224 - -
Pral4763g00019 900 Pfam Myb DNA-binding like 732 815 IPR039467 -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 94 110 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 843 872 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 1 130 - -
Pral4763g00019 900 CDD SANT 741 782 IPR001005 -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 561 576 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 431 643 - -
Pral4763g00019 900 Coils Coil 578 598 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 579 596 - -
Pral4763g00019 900 SMART sant 738 786 IPR001005 -
Pral4763g00019 900 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 868 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 241 276 - -
Pral4763g00019 900 MobiDBLite consensus disorder prediction 33 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4763g00019 Pral-Chr4763 123606 134430 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4763g00019 Myb_DNA-bind_7 2.5e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4763g00019 K15198 - gmx:100792788 620.157