Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4763g00018 ATGGATCCATTTGATGATGTTTTGCCAGAAGCTCCTGTTTCACGTGGTAGGGTGGGTGGCAAGTTTGTTCCAAAGGCCAAAGCTAAACAGCTGGCTCGAAAGGAAATATCTACATCAAATCAAGCAAACTCATCTAATGATGGAAAGAATGAGCAAGTTGCATCATCATCCATGAGCTCGGACACAGTAGGAAATGTTCCAACAAAAAGTAATAATCCAGTTGATTTAACTCCAGATAAATCAGCTAAGGAATTTCTGAAATCCAGTCTTGGTTCACCGATAGAAACCCCTTTTTTGGATAATAATAATAATCCTGACCCAGAGTTTCAACAAATTGATGTAAGTGGGCGCGAGGCAGAACCGGTTGAAGCTCAGCCTTCAACCATTGCAGCATCTGAGGTCAATAGTGATTGGACTACCAATTTTCCAAAAGCAGCTAATGAGGCGGACCTTGTCAGTTTTGATGTGGGTCTAGTAGTTGCCGCTGTTCCTGGGTCTGACCTTCATGATGCCCAACCAGATCTGTTGACAAATGTGATCGATCCATCTACAGCTAACTCAACCATTATTGAGAATGAACCTTCTAAATACTGGGAAGGCGAAGGTCCATTTCTTGATGGCAGCAAAAGCTTGGAACCTACTGATTCCTCATTGCAAGCTGGTCCTAACGTGGAATCCCGAGGTGCTTCAGATTGTAAGGTTGCAATGTTGGAGCCAAGTCATTCAAATTCTAACCTTGAGAGAACAGGAGAGGTAGAGTCTTCTGAATTTGAATTGGATCCTTTCAGAGACACTCTCCCTGATCCTGGTCTTAGGAATGCTCGCAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGAGCAGGGACTACAGCAGTTGTTGCCTCTGCTTCATCTAATGACATCCTTAGGACAATCAATACATTAAGCGATGCTGATAATTCTTGCTCGAGTGTGCCATTGTCTGAGGACAAAAGAAGCTTGGGAACAGTAATTCCTTCACAATCAGAGCCTCCTCCTGCCTTGCTTTCAGAGGTTTCTGTTCACCATGGGCCTAAAGATTGGCCTTCTAACAGTGGAAAACCAGCGGGGGAGGCTACAGACATATTTTCTGTGTTGGAGAGCCTCGATGACTTTCTCACACATGATGGCTCTAGTGCAGGAAATCCAGCTCTTCATTCTTTCCATGAGGAGGGAACAGAGGATTTTGTGAACCAGCCATGTCATATTTCCCAAGCTCAAAAGTGTCCGGACTATAAGGCCACTCACGATTCATTGGCCTTCAAGGAAGCTGCAAGCCTCAGTGAGGGTGATTCTCACACTAACAATGGAGGGCTGGGAGCAGAGGATGCAGGAGGGTCAAATCCTACCCACCCTCTTGATGATACCCTTGATTATTCATCCATGAATTCTGGCTCAGATCCAACTTTTGAAATTCCAGTGCGTGAAGAACCACCTGAAGAACCAACAAATACAGCAAATAATCCTACCTATGATGACCTTTTGCATGTGGACGATGTTCCTGGAGAAAAAGATGGAGGTTATAAAGCAGAAGATGCCACAATGTCAAGTTCTGCGAAAAATATTATGAAATCTTCTGTAGTAGGTGAGAAGGGTAAAGTTGATAAACCTCGAAGGCAGGTGAGAAAGCGAGTTAATCTTAAAACTGTTGATCCAGTGGAGAATGAGGATCCTGAGGAGGAGGATGAGCTTGACCCTACTTATTCTAACATTGGTGAACTTGAAGAACAACATGATGAATATGAATTGAATAATGGATGCGTGAAGAAAAAGAAGAAATCTGTGACCAAAAATGCAAAACCACATCAAAAGCGTAAAAGGGCCAATGAGGATTTAGATAAAGCTACTAAAGAACCTCGTAAAAAATTCTCTCATTCAACCCAACGAAGAAAAAGATGTGTGGATAAGACTCTGCTGGAAATTCCTGAGGATGAACTGGATCCTCAAACATTACGTATCAAGGATATTATACTACTTGCAGAGTATAGGGAGCGACAAGCGAAAAAGGAGGCAATGGCATCAAAAACATCTTCGATTAATGGAAGAGATGGAGACTCCCTTCATAATGCTGCTGCTCGTGATGAAGACATGGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCCACTGAAAGCGTACCATTAGCTCCCACGTTATTCAATTACCAGTCTTTCATGGACAAGAAACCTAGAGGAAAATGGTCAAAACAAGACACTGAGCTGTTCTATGAGGCCATTCGCCAGTTTGGCACAGATTTTTCTATGATACAACAGCTTTTCCCAGATCGAACACGTCATCAAATTAAGTTGAAGTACAAACAGGAAGAACGACAACATCCTTTACTACTATCTGATGCTGTAAATAATCGCACAAAAGATCTTTCTCATTATAAATCAGTTTTTGAGCGGCTGCAACGAGCTTCTGCTAAGACAGAACAAGACACTACGGACGCCTCAGTTGGCATGACAGAAGAAGTGGTGGACTTGACATCTGATCCTAATCCTAATCCTAATGAAGCAAAAGATGCGAAGCCGGAGCAGGATGGCTCTGTGCAAGATCATCAGGAAGATAACGTGTCATATCATAGTGCTGAGAAATCTGATGAAATGATGATGATGAAGAATTCCAAAGAATGTGTCAATATAAAAGCGAATATTAGTGTTATGAGATCTTTTTTAAATTAA 2706 0.4235 MDPFDDVLPEAPVSRGRVGGKFVPKAKAKQLARKEISTSNQANSSNDGKNEQVASSSMSSDTVGNVPTKSNNPVDLTPDKSAKEFLKSSLGSPIETPFLDNNNNPDPEFQQIDVSGREAEPVEAQPSTIAASEVNSDWTTNFPKAANEADLVSFDVGLVVAAVPGSDLHDAQPDLLTNVIDPSTANSTIIENEPSKYWEGEGPFLDGSKSLEPTDSSLQAGPNVESRGASDCKVAMLEPSHSNSNLERTGEVESSEFELDPFRDTLPDPGLRNARKFQPKIKPRPRAGTTAVVASASSNDILRTINTLSDADNSCSSVPLSEDKRSLGTVIPSQSEPPPALLSEVSVHHGPKDWPSNSGKPAGEATDIFSVLESLDDFLTHDGSSAGNPALHSFHEEGTEDFVNQPCHISQAQKCPDYKATHDSLAFKEAASLSEGDSHTNNGGLGAEDAGGSNPTHPLDDTLDYSSMNSGSDPTFEIPVREEPPEEPTNTANNPTYDDLLHVDDVPGEKDGGYKAEDATMSSSAKNIMKSSVVGEKGKVDKPRRQVRKRVNLKTVDPVENEDPEEEDELDPTYSNIGELEEQHDEYELNNGCVKKKKKSVTKNAKPHQKRKRANEDLDKATKEPRKKFSHSTQRRKRCVDKTLLEIPEDELDPQTLRIKDIILLAEYRERQAKKEAMASKTSSINGRDGDSLHNAAARDEDMGSEYGRGSDDDQATESVPLAPTLFNYQSFMDKKPRGKWSKQDTELFYEAIRQFGTDFSMIQQLFPDRTRHQIKLKYKQEERQHPLLLSDAVNNRTKDLSHYKSVFERLQRASAKTEQDTTDASVGMTEEVVDLTSDPNPNPNEAKDAKPEQDGSVQDHQEDNVSYHSAEKSDEMMMMKNSKECVNIKANISVMRSFLN 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4763g00018 901 MobiDBLite consensus disorder prediction 196 228 - -
Pral4763g00018 901 SMART sant 737 785 IPR001005 -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 846 873 - -
Pral4763g00018 901 Pfam Myb DNA-binding like 731 814 IPR039467 -
Pral4763g00018 901 Coils Coil 577 597 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 502 516 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 459 474 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 560 575 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 329 362 - -
Pral4763g00018 901 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 733 789 IPR017930 -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 578 595 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 251 265 - -
Pral4763g00018 901 Gene3D - 741 813 - -
Pral4763g00018 901 SUPERFAMILY Homeodomain-like 739 787 IPR009057 -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 210 224 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 610 628 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 94 110 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 1 130 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 431 641 - -
Pral4763g00018 901 CDD SANT 740 781 IPR001005 -
Pral4763g00018 901 FunFam Predicted protein 741 818 - -
Pral4763g00018 901 ProSiteProfiles SANT domain profile. 736 787 IPR017884 -
Pral4763g00018 901 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 873 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 673 695 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 241 276 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 835 873 - -
Pral4763g00018 901 MobiDBLite consensus disorder prediction 33 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4763g00018 Pral-Chr4763 123606 134430 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4763g00018 Myb_DNA-bind_7 2.5e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4763g00018 K15198 - gmx:100792788 614.764