Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4763g00017 ATGGATCCATTTGATGATGTTTTGCCAGAAGCTCCTGTTTCACGTGGTAGGGTGGGTGGCAAGTTTGTTCCAAAGGCCAAAGCTAAACAGCTGGCTCGAAAGGAAATATCTACATCAAATCAAGCAAACTCATCTAATGATGGAAAGAATGAGCAAGTTGCATCATCATCCATGAGCTCGGACACAGTAGGAAATGTTCCAACAAAAAGTAATAATCCAGTTGATTTAACTCCAGATAAATCAGCTAAGGAATTTCTGAAATCCAGTCTTGGTTCACCGATAGAAACCCCTTTTTTGGATAATAATAATAATCCTGACCCAGAGTTTCAACAAATTGATGTAAGTGGGCGCGAGGCAGAACCGGTTGAAGCTCAGCCTTCAACCATTGCAGCATCTGAGGTCAATAGTGATTGGACTACCAATTTTCCAAAAGCAGCTAATGAGGCGGACCTTGTCAGTTTTGATGTGGGTCTAGTAGTTGCCGCTGTTCCTGGGTCTGACCTTCATGATGCTAACTCAACCATTATTGAGAATGAACCTTCTAAATACTGGGAAGGCGAAGGTCCATTTCTTGATGGCAGCAAAAGCTTGGAACCTACTGATTCCTCATTGCAAGCTGGTCCTAACGTGGAATCCCGAGGTGCTTCAGATTGTAAGGTTGCAATGTTGGAGCCAAGTCATTCAAATTCTAACCTTGAGAGAACAGGAGAGGTAGAGTCTTCTGAATTTGAATTGGATCCTTTCAGAGACACTCTCCCTGATCCTGGTCTTAGGAATGCTCGCAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGAGCAGGGACTACAGCAGTTGTTGCCTCTGCTTCATCTAATGACATCCTTAGGACAATCAATACATTAAGCGATGCTGATAATTCTTGCTCGAGTGTGCCATTGTCTGAGGACAAAAGAAGCTTGGGAACAGTAATTCCTTCACAATCAGAGCCTCCTCCTGCCTTGCTTTCAGAGGTTTCTGTTCACCATGGGCCTAAAGATTGGCCTTCTAACAGTGGAAAACCAGCGGGGGAGGCTACAGACATATTTTCTGTGTTGGAGAGCCTCGATGACTTTCTCACACATGATGGCTCTAGTGCAGGAAATCCAGCTCTTCATTCTTTCCATGAGGAGGGAACAGAGGATTTTGTGAACCAGCCATGTCATATTTCCCAAGCTCAAAAGTGTCCGGACTATAAGGCCACTCACGATTCATTGGCCTTCAAGGAAGCTGCAAGCCTCAGTGAGGGTGATTCTCACACTAACAATGGAGGGCTGGGAGCAGAGGATGCAGGAGGGTCAAATCCTACCCACCCTCTTGATGATACCCTTGATTATTCATCCATGAATTCTGGCTCAGATCCAACTTTTGAAATTCCAGTGCGTGAAGAACCACCTGAAGAACCAACAAATACAGCAAATAATCCTACCTATGATGACCTTTTGCATGTGGACGATGTTCCTGGAGAAAAAGTTGATGGAGGTTATAAAGCAGAAGATGCCACAATGTCAAGTTCTGCGAAAAATATTATGAAATCTTCTGTAGTAGGTGAGAAGGGTAAAGTTGATAAACCTCGAAGGCAGGTGAGAAAGCGAGTTAATCTTAAAACTGTTGATCCAGTGGAGAATGAGGATCCTGAGGAGGAGGATGAGCTTGACCCTACTTATTCTAACATTGGTGAACTTGAAGAACAACATGATGAATATGAATTGAATAATGGATGCGTGAAGAAAAAGAAGAAATCTGTGACCAAAAATGCAAAACCACATCAAAAGCGTAAAAGGGCCAATGAGGATTTAGATAAAGCTACTAAAGAACCTCGTAAAAAATTCTCTCATTCAACCCAACGAAGAAAAAGATGTGTGGATAAGACTCTGCTGGAAATTCCTGAGGATGAACTGGATCCTCAAACATTACGTATCAAGGATATTATACTACTTGCAGAGTATAGGGAGCGACAAGCGAAAAAGGAGGCAATGGCATCAAAAACATCTTCGATTAATGGAAGAGATGGAGACTCCCTTCATAATGCTGCTGCTCGTGATGAAGACATGGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCCACTGAAAGCGTACCATTAGCTCCCACGTTATTCAATTACCAGTCTTTCATGGACAAGAAACCTAGAGGAAAATGGTCAAAACAAGACACTGAGCTGTTCTATGAGGCCATTCGCCAGTTTGGCACAGATTTTTCTATGATACAACAGCTTTTCCCAGATCGAACACGTCATCAAATTAAGTTGAAGTACAAACAGGAAGAACGACAACATCCTTTACTACTATCTGATGCTGTAAATAATCGCACAAAAGATCTTTCTCATTATAAATCAGTTTTTGAGCGGCTGCAACGAGCTTCTGCTAAGACAGAACAAGACACTACGGACGCCTCAGTTGGCATGACAGAAGAAGTGGTGGACTTGACATCTGATCCTAATCCTAATCCTAATGAAGCAAAAGATGCGAAGCCGGAGCAGGATGGCTCTGTGCAAGATCATCAGGAAGATAACGTGTCATATCATAGTGCTGAGAAATCTGATGAAATGATGATGATGAAGAATTCCAAAGAATGTGTCAATATAAAAGCGAATATTAGTGTTATGAGATCTTTTTTAAATTAA 2667 0.4229 MDPFDDVLPEAPVSRGRVGGKFVPKAKAKQLARKEISTSNQANSSNDGKNEQVASSSMSSDTVGNVPTKSNNPVDLTPDKSAKEFLKSSLGSPIETPFLDNNNNPDPEFQQIDVSGREAEPVEAQPSTIAASEVNSDWTTNFPKAANEADLVSFDVGLVVAAVPGSDLHDANSTIIENEPSKYWEGEGPFLDGSKSLEPTDSSLQAGPNVESRGASDCKVAMLEPSHSNSNLERTGEVESSEFELDPFRDTLPDPGLRNARKFQPKIKPRPRAGTTAVVASASSNDILRTINTLSDADNSCSSVPLSEDKRSLGTVIPSQSEPPPALLSEVSVHHGPKDWPSNSGKPAGEATDIFSVLESLDDFLTHDGSSAGNPALHSFHEEGTEDFVNQPCHISQAQKCPDYKATHDSLAFKEAASLSEGDSHTNNGGLGAEDAGGSNPTHPLDDTLDYSSMNSGSDPTFEIPVREEPPEEPTNTANNPTYDDLLHVDDVPGEKVDGGYKAEDATMSSSAKNIMKSSVVGEKGKVDKPRRQVRKRVNLKTVDPVENEDPEEEDELDPTYSNIGELEEQHDEYELNNGCVKKKKKSVTKNAKPHQKRKRANEDLDKATKEPRKKFSHSTQRRKRCVDKTLLEIPEDELDPQTLRIKDIILLAEYRERQAKKEAMASKTSSINGRDGDSLHNAAARDEDMGSEYGRGSDDDQATESVPLAPTLFNYQSFMDKKPRGKWSKQDTELFYEAIRQFGTDFSMIQQLFPDRTRHQIKLKYKQEERQHPLLLSDAVNNRTKDLSHYKSVFERLQRASAKTEQDTTDASVGMTEEVVDLTSDPNPNPNEAKDAKPEQDGSVQDHQEDNVSYHSAEKSDEMMMMKNSKECVNIKANISVMRSFLN 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4763g00017 888 MobiDBLite consensus disorder prediction 488 502 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 445 460 - -
Pral4763g00017 888 FunFam Predicted protein 728 805 - -
Pral4763g00017 888 Coils Coil 564 584 - -
Pral4763g00017 888 SMART sant 724 772 IPR001005 -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 315 348 - -
Pral4763g00017 888 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 720 776 IPR017930 -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 227 262 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 660 682 - -
Pral4763g00017 888 Gene3D - 728 800 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 547 562 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 183 214 - -
Pral4763g00017 888 SUPERFAMILY Homeodomain-like 726 774 IPR009057 -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 565 582 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 417 629 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 94 110 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 1 130 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 237 251 - -
Pral4763g00017 888 Pfam Myb DNA-binding like 718 801 IPR039467 -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 597 615 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 196 210 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 822 860 - -
Pral4763g00017 888 ProSiteProfiles SANT domain profile. 723 774 IPR017884 -
Pral4763g00017 888 CDD SANT 727 768 IPR001005 -
Pral4763g00017 888 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 860 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 833 860 - -
Pral4763g00017 888 MobiDBLite consensus disorder prediction 33 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4763g00017 Pral-Chr4763 123606 134430 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4763g00017 Myb_DNA-bind_7 2.4e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4763g00017 K15198 - gmx:100792788 605.905