Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4763g00009 ATGATGAGGCTACAGACATATGCGGGGCTTAGTTTCGTTGCAACTCTAGCTGTTACATATCATGCATTCAACAGCAGAGGTCAATTTTATCCAGCAATGGTTTTTCTGTCTACTTCCAAGATCAGCTTGGTACTTCTTCTCAACATGGGTCTGGTCATTATGTGTCTTTTATGGCAATTAACGAAGAGGGTCTTCCTTGGCACACTGCGAGAGGCAGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAAATTCTCTTTGCCATCACCATTTTTAGGCAGGATTTCTCTGTTACATTCCTTGCTATGGTCACGGCACTGTTGTTGATCAAAGCTTTACATTGGTTGGCTCAGAAAAGAGTTGAATATATTGAGACCACTCCTACAGTGCCCTTGTTGTCTCACATTCGAATTGTGTCTTTTATGGGTTTTCTCCTTCTTCTGGATGGACTCTTTTTATATAGTTCCATGAAGCATTTGATACAATCATGGCAGGCTTCAGTTTCCCTGTTTTTTGCTTTCGAGTACATGATACTGGCAACAACAACAGTGTCAATTTTTGTGAAATATCTTTTCTATGTTAGCGACATGCTTATGGAAGGACAATGGGAAAAGAAACCAGTCTTTACATTCTACTTGGAACTCATTAGGGATTTGCTTCACTTGTCTATGTACATGTGTTTCTTCCTTGTAATTTTCATAAATTATGGTGTGCCTTTGCACTTAATACGGGAGCTGTATGAGACATTTAGGAACTTCAGAGTTCGTGTCGCTGACTACATACGGTACCGTAAGATTACATCAAATATGAATGATCGGTTTCCTGATGCAACCCCCGAAGAGCTTAATGCAAGCGATGCTACATGTATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAACTTATATGTGGACATCTTTTTCATGTGCATTGCCTCCGATCATGGTTGGAGCGACAACATACTTGCCCTACCTGCAGAGCCTTGGTTGTACCACCTGAAAATGGGGCAACTACTGCTGGAGGGCAGCATGGAGCACAGTCAGATCGACAGGGAGCAGGAGCAGGAACAGGAACAAGTACAGGAAGCTCAGCCCAAGCTGAAGGTGGCAGTGGGGCAGCTACTGATAATTTGAGTCGTCATCAAGCTAGACTCCAAGCTGCAGCTGCTGCTGCTTCAATGTACGAGAAGTCTTATGTATACCCCTCGGCAACTTCTTTAGTATGCGCCCCTGGATACACTGTTTATCCTCCTGTTCAAAGACCGGCTGCTGAATCTACTAATACTGAATTTAATGTAGAACATGAACAAACACAACGGCAGTTTCTCATCCCTGGTGGACCAATGAATGTTTCCTTTCATCCAATGGGACCGTTTCTTTTTCCCCCTTCTCTAACGCATGTAGCAAATGAGAATTATGGGGAGGGATCTGGATCTGATCCAAATACGCCAAAGTCTCTGCTGGAAGCTCAAAGACGCCAGATTGAGATTCTGCAAAATCAGCTCCAGATTCTGCGGAAGGCATGTGATGAGGAAAATGTGAATGGGGGCAAGACGACATCAAGTGGCAAAGACAAGCAGGTTGCTTCCTCTTCATCTGTGTCTGATATTCAAGGCAGCAGTTTATAA 1638 0.4359 MMRLQTYAGLSFVATLAVTYHAFNSRGQFYPAMVFLSTSKISLVLLLNMGLVIMCLLWQLTKRVFLGTLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMGFLLLLDGLFLYSSMKHLIQSWQASVSLFFAFEYMILATTTVSIFVKYLFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYMCFFLVIFINYGVPLHLIRELYETFRNFRVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATTAGGQHGAQSDRQGAGAGTGTSTGSSAQAEGGSGAATDNLSRHQARLQAAAAAASMYEKSYVYPSATSLVCAPGYTVYPPVQRPAAESTNTEFNVEHEQTQRQFLIPGGPMNVSFHPMGPFLFPPSLTHVANENYGEGSGSDPNTPKSLLEAQRRQIEILQNQLQILRKACDEENVNGGKTTSSGKDKQVASSSSVSDIQGSSL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4763g00009 545 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Pral4763g00009 545 Pfam Ring finger domain 291 330 IPR001841 -
Pral4763g00009 545 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Pral4763g00009 545 MobiDBLite consensus disorder prediction 516 545 - -
Pral4763g00009 545 SUPERFAMILY RING/U-box 272 336 - -
Pral4763g00009 545 MobiDBLite consensus disorder prediction 517 545 - -
Pral4763g00009 545 PANTHER RING ZINC FINGER PROTEIN 1 525 - -
Pral4763g00009 545 SMART ring_2 292 329 IPR001841 -
Pral4763g00009 545 CDD RING-H2_synoviolin 289 330 - -
Pral4763g00009 545 MobiDBLite consensus disorder prediction 340 382 - -
Pral4763g00009 545 MobiDBLite consensus disorder prediction 343 382 - -
Pral4763g00009 545 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 264 339 - -
Pral4763g00009 545 Coils Coil 491 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4763g00009 Pral-Chr4763 57458 63924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4763g00009 1 528 C3H Transcription Factor Family AT3G16090 64.486 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4763g00009 K10601 - gmx:100816441 792.341