Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4763g00008 ATGATGAGGCTACAGACATATGCGGGGCTTAGTTTCGTTGCAACTCTAGCTGTTACATATCATGCATTCAACAGCAGAGGTCAATTTTATCCAGCAATGGTTTTTCTGTCTACTTCCAAGATCAGCTTGGTACTTCTTCTCAACATGGGTCTGGTCATTATGTGTCTTTTATGGCAATTAACGAAGAGGGTCTTCCTTGGCACACTGCGAGAGGCAGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAAATTCTCTTTGCCATCACCATTTTTAGGCAGGATTTCTCTGTTACATTCCTTGCTATGGTCACGGCACTGTTGTTGATCAAAGCTTTACATTGGTTGGCTCAGAAAAGAGTTGAATATATTGAGACCACTCCTACAGTGCCCTTGTTGTCTCACATTCGAATTGTGTCTTTTATGGGTTTTCTCCTTCTTCTGGATGGACTCTTTTTATATAGTTCCATGAAGCATTTGATACAATCATGGCAGGCTTCAGTTTCCCTGTTTTTTGCTTTCGAGTACATGATACTGGCAACAACAACAGTGTCAATTTTTGTGAAATATCTTTTCTATGTTAGCGACATGCTTATGGAAGGACAATGGGAAAAGAAACCAGTCTTTACATTCTACTTGGAACTCATTAGGGATTTGCTTCACTTGTCTATGTACATGTGTTTCTTCCTTGTAATTTTCATAAATTATGGTGTGCCTTTGCACTTAATACGGGAGCTGTATGAGACATTTAGGAACTTCAGAGTTCGTGTCGCTGACTACATACGGTACCGTAAGATTACATCAAATATGAATGATCGGTTTCCTGATGCAACCCCCGAAGAGCTTAATGCAAGCGATGCTACATGTATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAACTTATATGTGGACATCTTTTTCATGTGCATTGCCTCCGATCATGGTTGGAGCGACAACATACTTGCCCTACCTGCAGAGCCTTGGTTGTACCACCTGAAAATGGGGCAACTACTGCTGGAGGGCAGCATGGAGCACAGTCAGATCGACAGGGAGCAGGAACAGGAACAAGTACAGGAAGCTCAGCCCAAGCTGAAGGTGGCAGTGGGGCAGCTACTGATAATTTGAGTCGTCATCAAGCTAGACTCCAAGCTGCAGCTGCTGCTGCTTCAATGTACGAGAAGTCTTATGTATACCCCTCGGCAACTTCTTTAGTATGCGCCCCTGGATACACTGTTTATCCTCCTGTTCAAAGACCGGCTGCTGAATCTACTAATACTGAATTTAATGTAGAACATGAACAAACACAACGGCAGTTTCTCATCCCTGGTGGACCAATGAATGTTTCCTTTCATCCAATGGGACCGTTTCTTTTTCCCCCTTCTCTAACGCATGTAGCAAATGAGAATTATGGGGAGGGATCTGGATCTGATCCAAATACGCCAAAGTCTCTGCTGGAAGCTCAAAGACGCCAGATTGAGATTCTGCAAAATCAGCTCCAGATTCTGCGGAAGGCATGTGATGAGGAAAATGTGAATGGGGGCAAGACGACATCAAGTGGCAAAGACAAGCAGGTTGCTTCCTCTTCATCTGTGTCTGATATTCAAGGCAGCAGTTTATAA 1632 0.435 MMRLQTYAGLSFVATLAVTYHAFNSRGQFYPAMVFLSTSKISLVLLLNMGLVIMCLLWQLTKRVFLGTLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMGFLLLLDGLFLYSSMKHLIQSWQASVSLFFAFEYMILATTTVSIFVKYLFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYMCFFLVIFINYGVPLHLIRELYETFRNFRVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATTAGGQHGAQSDRQGAGTGTSTGSSAQAEGGSGAATDNLSRHQARLQAAAAAASMYEKSYVYPSATSLVCAPGYTVYPPVQRPAAESTNTEFNVEHEQTQRQFLIPGGPMNVSFHPMGPFLFPPSLTHVANENYGEGSGSDPNTPKSLLEAQRRQIEILQNQLQILRKACDEENVNGGKTTSSGKDKQVASSSSVSDIQGSSL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4763g00008 543 MobiDBLite consensus disorder prediction 515 543 - -
Pral4763g00008 543 Pfam Ring finger domain 291 330 IPR001841 -
Pral4763g00008 543 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Pral4763g00008 543 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Pral4763g00008 543 Coils Coil 489 516 - -
Pral4763g00008 543 SUPERFAMILY RING/U-box 272 336 - -
Pral4763g00008 543 MobiDBLite consensus disorder prediction 343 380 - -
Pral4763g00008 543 MobiDBLite consensus disorder prediction 340 380 - -
Pral4763g00008 543 SMART ring_2 292 329 IPR001841 -
Pral4763g00008 543 CDD RING-H2_synoviolin 289 330 - -
Pral4763g00008 543 PANTHER RING ZINC FINGER PROTEIN 1 523 - -
Pral4763g00008 543 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 264 339 - -
Pral4763g00008 543 MobiDBLite consensus disorder prediction 514 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4763g00008 Pral-Chr4763 57458 63924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4763g00008 1 526 C3H Transcription Factor Family AT3G16090 64.540 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4763g00008 K10601 - gmx:100816441 795.808