Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4763g00007 ATGATGAGGCTACAGACATATGCGGGGCTTAGTTTCGTTGCAACTCTAGCTGTTACATATCATGCATTCAACAGCAGAGGTCAATTTTATCCAGCAATGGTTTTTCTGTCTACTTCCAAGATCAGCTTGGTACTTCTTCTCAACATGGGTCTGGTCATTATGTGTCTTTTATGGCAATTAACGAAGAGGGTCTTCCTTGGCACACTGCGAGAGGCAGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAAATTCTCTTTGCCATCACCATTTTTAGGCAGGATTTCTCTGTTACATTCCTTGCTATGGTCACGGCACTGTTGTTGATCAAAGCTTTACATTGGTTGGCTCAGAAAAGAGTTGAATATATTGAGACCACTCCTACAGTGCCCTTGTTGTCTCACATTCGAATTGTGTCTTTTATGGGTTTTCTCCTTCTTCTGGATGGACTCTTTTTATATAGTTCCATGAAGCATTTGATACAATCATGGCAGGCTTCAGTTTCCCTGTTTTTTGCTTTCGAGTACATGATACTGGCAACAACAACAGTGTCAATTTTTGTGAAATATCTTTTCTATGTTAGCGACATGCTTATGGAAGGACAATGGGAAAAGAAACCAGTCTTTACATTCTACTTGGAACTCATTAGGGATTTGCTTCACTTGTCTATGTACATGTGTTTCTTCCTTGTAATTTTCATAAATTATGGTGTGCCTTTGCACTTAATACGGGAGCTGTATGAGACATTTAGGAACTTCAGAGTTCGTGTCGCTGACTACATACGGTACCGTAAGATTACATCAAATATGAATGATCGGTTTCCTGATGCAACCCCCGAAGAGCTTAATGCAAGCGATGCTACATGTATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAACTTATATGTGGACATCTTTTTCATGTGCATTGCCTCCGATCATGGTTGGAGCGACAACATACTTGCCCTACCTGCAGAGCCTTGGTTGTACCACCTGAAAATGGGGCAACTACTGCTGGAGGGCAGCATGGAGCACAGTCAGATCGACAGGGAACAGGAACAAGTACAGGAAGCTCAGCCCAAGCTGAAGGTGGCAGTGGGGCAGCTACTGATAATTTGAGTCGTCATCAAGCTAGACTCCAAGCTGCAGCTGCTGCTGCTTCAATGTACGAGAAGTCTTATGTATACCCCTCGGCAACTTCTTTAGTATGCGCCCCTGGATACACTGTTTATCCTCCTGTTCAAAGACCGGCTGCTGAATCTACTAATACTGAATTTAATGTAGAACATGAACAAACACAACGGCAGTTTCTCATCCCTGGTGGACCAATGAATGTTTCCTTTCATCCAATGGGACCGTTTCTTTTTCCCCCTTCTCTAACGCATGTAGCAAATGAGAATTATGGGGAGGGATCTGGATCTGATCCAAATACGCCAAAGTCTCTGCTGGAAGCTCAAAGACGCCAGATTGAGATTCTGCAAAATCAGCTCCAGATTCTGCGGAAGGCATGTGATGAGGAAAATGTGAATGGGGGCAAGACGACATCAAGTGGCAAAGACAAGCAGGTTGCTTCCTCTTCATCTGTGTCTGATATTCAAGGCAGCAGTTTATAA 1626 0.4342 MMRLQTYAGLSFVATLAVTYHAFNSRGQFYPAMVFLSTSKISLVLLLNMGLVIMCLLWQLTKRVFLGTLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMGFLLLLDGLFLYSSMKHLIQSWQASVSLFFAFEYMILATTTVSIFVKYLFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYMCFFLVIFINYGVPLHLIRELYETFRNFRVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATTAGGQHGAQSDRQGTGTSTGSSAQAEGGSGAATDNLSRHQARLQAAAAAASMYEKSYVYPSATSLVCAPGYTVYPPVQRPAAESTNTEFNVEHEQTQRQFLIPGGPMNVSFHPMGPFLFPPSLTHVANENYGEGSGSDPNTPKSLLEAQRRQIEILQNQLQILRKACDEENVNGGKTTSSGKDKQVASSSSVSDIQGSSL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4763g00007 541 PANTHER RING ZINC FINGER PROTEIN 1 521 - -
Pral4763g00007 541 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Pral4763g00007 541 MobiDBLite consensus disorder prediction 512 541 - -
Pral4763g00007 541 MobiDBLite consensus disorder prediction 340 378 - -
Pral4763g00007 541 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Pral4763g00007 541 SUPERFAMILY RING/U-box 272 336 - -
Pral4763g00007 541 MobiDBLite consensus disorder prediction 513 541 - -
Pral4763g00007 541 MobiDBLite consensus disorder prediction 343 378 - -
Pral4763g00007 541 Pfam Ring finger domain 291 330 IPR001841 -
Pral4763g00007 541 SMART ring_2 292 329 IPR001841 -
Pral4763g00007 541 CDD RING-H2_synoviolin 289 330 - -
Pral4763g00007 541 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 264 339 - -
Pral4763g00007 541 Coils Coil 487 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4763g00007 Pral-Chr4763 57458 63924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4763g00007 1 524 C3H Transcription Factor Family AT3G16090 64.850 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4763g00007 K10601 - gmx:100816441 795.038