Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4760g00139 ATGTCTGAAAATTCTGAGGGCACTTCATCTGCATTAAATCGGTCTAATTCTCAGGTTTTTGAGGACACTGCCCTGCTAGCTGACCACTCAGTCCGGACTGCAGTATGTGCTCTCTGCCAAAAGGCCCTATCGCCTGATATTGAGATTATAAATGATCTTGCACCTATTGGTTTATGTGGTGATTGTAAATTTTTATTACTTGAAGACGTTGGGACACATTCCCAAAACCCCCAAAGAATGCATAGGGCAGGATCCAGGAACAGCAGTTCTGAATCAATTGAGAATGGCTTGTCACGTCAGCTTCCCGGTATGGCTAATTCTGTGAGACAAAATCAATCATCTGCATCTGCACTGGATGATCAGCCTGCTGATGGCAATACGCCCTCTTGGCTATCGCAGTATGGTAGTGCCCATACTACCCCTAGTGAGTCTCGAAGATGGAGGCGGGTTTTCTCTGATACTGATAGTGATGGTTTTGATAACTGGAGTTCTCTTTATGGGGAGAATGAATCAAATGCAAGTATTAGGCGCTACAGAGTCCCCAGTGGTGAGACTGATTCCTTCTCTTTCAGTGCTTATGGAGCTGAGTCTGAGGTATCGATGGATAGATATAGTTTTGTGGGTACAGGAATCTTAAATTTACCAGATGAGGGAGATGAGTTTGATAGTGACACTGATATAGATCCAATGCATGCTGGCCTTAGCCATTGGAATTCTGATGATATGGAAGAAGAGGATGAGGATGAGGAAGAGGAAAGGGAATGGGAAGTAGCTGAGGCTGAGGAAGCGGAAGCCACTGCCCGCCTTCAAATATTTTTTACCTCAAGTCCAAGTGAGAGAAGTGACCTCATTAACTGGGGCCCACAGTTTAATTTTCCTGAATCTGAGGAATTATTAAGTAGGAGAGTTAGGGATAGATGGCAAACTTACACTGATCACAGCTCCAATTACTTGGAGGAGGCACGTTCACCTCCTTATGGTGCAAATTTTGGGGATTATCTTGATGCTAGGCAATTTGAAAATCTGCTAGAGCATCTTGCTGAGAATGATAACTCAAGACGAGGAGCACCTCCTGCAGCAGTGTCTTTTGTACATAGTCTGCCCTGTATTGTTATAAGCAAAGAACATGAGAAGCATGATGAACTTGTATGTGCCATTTGCAAGGATGCCTTGTCCATAGGCGCTGAAGTAAATCAGCTTCCCTGCTCTCACCTTTATCATGCCTGCTGCATTTTGCCATGGTTGAGTGCACGGAATTCATGCCCTCTTTGTCGTTACGAGCTCCCTACAGATGATAAGGAGTATGAGGAAGGAAAGCGCAATATTGACATTAGAAGTGAGATCCATGAAGCGCAGCAGCTAAATGTGATGGATGGCAATTCTTCTGATGGAGCTGAAGCAAATGAAGAGGATGGTACTATCCAAGCTGGAGGACAGCAAAGTGAGCTTGTGAACATGGTTCCTGTAGTTAATCCTTCTGCTGGGAGGGGCGGTAGAGGAAGATGGTTTTTCTTTGCTGCTGCTCCAATTGTTAGTCTAGTGGGTATTGTTATTGTCTTATGGTTAGGCAACCCTCTAATTGAAGGTAGTAGACAATTGGGTTGCCACAATTTACAGGGGCAAAATCAGCATCAGGTTCATGTTTCTGCCTCACCCAACCATAGGGAGGATAGAAGCAGAAGATGGTGGTGTCTCTTCTAA 1701 0.4456 MSENSEGTSSALNRSNSQVFEDTALLADHSVRTAVCALCQKALSPDIEIINDLAPIGLCGDCKFLLLEDVGTHSQNPQRMHRAGSRNSSSESIENGLSRQLPGMANSVRQNQSSASALDDQPADGNTPSWLSQYGSAHTTPSESRRWRRVFSDTDSDGFDNWSSLYGENESNASIRRYRVPSGETDSFSFSAYGAESEVSMDRYSFVGTGILNLPDEGDEFDSDTDIDPMHAGLSHWNSDDMEEEDEDEEEEREWEVAEAEEAEATARLQIFFTSSPSERSDLINWGPQFNFPESEELLSRRVRDRWQTYTDHSSNYLEEARSPPYGANFGDYLDARQFENLLEHLAENDNSRRGAPPAAVSFVHSLPCIVISKEHEKHDELVCAICKDALSIGAEVNQLPCSHLYHACCILPWLSARNSCPLCRYELPTDDKEYEEGKRNIDIRSEIHEAQQLNVMDGNSSDGAEANEEDGTIQAGGQQSELVNMVPVVNPSAGRGGRGRWFFFAAAPIVSLVGIVIVLWLGNPLIEGSRQLGCHNLQGQNQHQVHVSASPNHREDRSRRWWCLF 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4760g00139 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 370 442 IPR013083 -
Pral4760g00139 566 MobiDBLite consensus disorder prediction 74 145 - -
Pral4760g00139 566 PANTHER SI:CH211-59O9.10 41 430 - -
Pral4760g00139 566 Pfam Ring finger domain 384 425 IPR001841 -
Pral4760g00139 566 ProSiteProfiles Zinc finger RING-type profile. 384 425 IPR001841 -
Pral4760g00139 566 SMART ring_2 384 424 IPR001841 -
Pral4760g00139 566 MobiDBLite consensus disorder prediction 230 253 - -
Pral4760g00139 566 FunFam E3 ubiquitin-protein ligase RING1-like 345 431 - -
Pral4760g00139 566 MobiDBLite consensus disorder prediction 74 141 - -
Pral4760g00139 566 SUPERFAMILY RING/U-box 367 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4760g00139 Pral-Chr4760 740121 743121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4760g00139 26 566 C3H Transcription Factor Family AT5G01980 41.591 3.71e-120 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4760g00139 - - gmx:100797923 674.855