Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4760g00103 ATGCGGGAGGCATACGACGTCACCATAGAAGAAGAAGCAGCGTCGTCCGCGACGGTCGGAGAGGCATCCTCCGGGGTCGTTTTGCTGGGAAAGTACCGGTTAAAAAAGTTGTTGGGTGTGGGAGCCTTTGCCAAGGTGTATCACGCCACGAATGTGAGCACGGGACAGAGCGTGGCTATCAAAGCCGTGAGCAAGCGGGAAGTTTTCCGGGGAGGTCTCATGGAGCACGTTGAGAGGGAAATCTCTATCATGCGCCGCCTGCACCATCCCCACACCCTCAAGCTCTTCGAAGTCCTCGCTTCCAAGTCTAAAATTTACTTCGTCCTTGAGTTCGCCAAGGGCGGCGAGCTCTTTGACAAGGTCGCTCAGGGGCGATTCTCCGAAGATCTCAGCCGTCGCTATTTTCATCAGTTAATTTCCGCCGTCCGATACTGCCACTCTGCCGGCGTCTTCCACCGCGACCTCAAGCTTGATAACCTCTTGATCGACGAAAACATGGACCTCAAGGTTTCGGACTTCGGATTGAGTGCTCTGAAGGACCACGTCAGACCGGACGGTTTGCTGCACACCGTTTGCGGCACGCCGGCTTACGTGGCGCCGGAGATGCTCGCCAAGAAAGGCTACGACGGAGCGAAGGTCGACGTGTGGTCGTGCGGAGTCATCCTGTTCGTCCTCGCCGCCGGGTACCTCCCCTTCAACGACCACAATCTGGCAGCCATGTACAGGAAAATCTACAGAGGGCAATTTAGGTTCCCGAGATGGACGTCGCCGGAGCTCCGGCGTTTCCTGTCTCGGTTGCTGGACAAGAATCCCGAGACGAGAATCACGGTGGACGAGATCATCCGAGACCCATGGTTCAGCAAAGGGTACCGGGAGGTGCGGGTCCAGCACAAGGAATTCGAATCGGATCATGAGCAGAGCCGACACCGGGGACTGAACGCCTTCGATTTGATATCGTTTTCGTCCGGCCTGGATATGTCGGGCCTATTCACCGACTCAGGTTCGTCGGACTGCGTGGAACGCATCGTCTCGGGGGGAAAACCGGCGAACATAATGGAGAAGGTGGAGGGAGTGGCAAAAGCAGAGGGAGTGATGGTGAGCAAGGAGGAGAACGGGGAGGTAGCGAAGCTGGAGGGGCAAAATGGTAATATAATGATGAGGATCGGCATATACCGGCTAACGGATAAACTGGTAGTGGTGGAAGCGAAAAGGAGAGAAAGGAGAGCGGGAAATGGGAAAGGGACAAAATTTTGGGAGGATAAGCTGAAGCCGGAGCTCCAGAGACTGGTGTATAAAGCAGGAGACCAAAAATGA 1314 0.5548 MREAYDVTIEEEAASSATVGEASSGVVLLGKYRLKKLLGVGAFAKVYHATNVSTGQSVAIKAVSKREVFRGGLMEHVEREISIMRRLHHPHTLKLFEVLASKSKIYFVLEFAKGGELFDKVAQGRFSEDLSRRYFHQLISAVRYCHSAGVFHRDLKLDNLLIDENMDLKVSDFGLSALKDHVRPDGLLHTVCGTPAYVAPEMLAKKGYDGAKVDVWSCGVILFVLAAGYLPFNDHNLAAMYRKIYRGQFRFPRWTSPELRRFLSRLLDKNPETRITVDEIIRDPWFSKGYREVRVQHKEFESDHEQSRHRGLNAFDLISFSSGLDMSGLFTDSGSSDCVERIVSGGKPANIMEKVEGVAKAEGVMVSKEENGEVAKLEGQNGNIMMRIGIYRLTDKLVVVEAKRRERRAGNGKGTKFWEDKLKPELQRLVYKAGDQK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4760g00103 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Pral4760g00103 437 FunFam Non-specific serine/threonine protein kinase 112 293 - -
Pral4760g00103 437 Gene3D Transferase(Phosphotransferase) domain 1 115 312 - -
Pral4760g00103 437 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Pral4760g00103 437 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Pral4760g00103 437 SUPERFAMILY Protein kinase-like (PK-like) 28 307 IPR011009 -
Pral4760g00103 437 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 26 405 - -
Pral4760g00103 437 CDD CIPK_C 313 427 - -
Pral4760g00103 437 Gene3D Phosphorylase Kinase; domain 1 28 114 - -
Pral4760g00103 437 FunFam Aurora kinase A 26 115 - -
Pral4760g00103 437 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00103 437 Pfam NAF domain 312 368 IPR004041 GO:0007165
Pral4760g00103 437 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00103 437 Gene3D Kinase associated domain 1, KA1 313 432 - -
Pral4760g00103 437 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4760g00103 Pral-Chr4760 589316 590808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4760g00103 18 430 CBL-interacting serine-threonine protein kinases AT2G30360 58.294 6.69e-172 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral4760g00103 Pkinase 2.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4760g00103 - K12761 qlo:115953426 553.903