Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4760g00050 ATGGCTGCGTCATCATTAACACTTGGTTTTCTCCTCCATCTGGTTCTTCTTTCCCTTCTATTCGCAGCCAAGGCTCAAGAAGTGACCCAATTTTCCTATGAAGGATTCGTTAACGATGGGAGTCTAGTCCTCCAGGAAGTCGCGGGAATTACGAATGACCGTATGCTTATGCTCACCAACACATCCAACGATGTTGTAGGCCGTGCTTTCCATTCCAAAACAATTCGAATGCTTAACGATTCAGACGACCGACAAAAAGCTTCTTCCTTTAGCACATACTTTGTTTTCTCCATCGTCTCCTCAACCTCTGGTCCTGGTGGCTTTGGCCTTGCTTTCGTCCTAGCACCAGATATCGACATGTTTGTGGGCGCTCAAGCAGGGCACCATCTTGGTATTTATAGCGCTTCCAATGCTGTGAAGGAGACTCACATATTCGCAGTGGAATTCGATACGGTGAATGGCTCCGACAAAGGTGAGTCAGACACAGAAGGGAACGATGTTGGGATCAATGTCAATGGTACAGAGTCAGGTGTCTCTAAACCAGCTGCTTATTACATTGGGATGGATTCTAAACCGGTTAATTTCAGCATGGAGAAAGATGAAGCTGTACAAGCTTGGATAGATTATGATGGTGATAACAAGACAGTGAATGTGACCGTGGCTCCCGTAGGAGTGACTAAACCTTCCAGACCCCTTATATCAAATCGTTCCATTAACCTTACCACTGTTCTAAACGGCGAATACATGTACGCCGGTTTCTCAGCATCAACAGGGGAGGCAAGTAAAGCAAGTTCTCATTACATTTTGGGGTGGAGCTTTGCAGTCAATGCACCTGCTCCTCCGCTTGACATTACAAAACTTCCACGTCCACCACCAAAAGTGAAAGACACTTCCTCTTTTTCTTGGGTCAATTTTGCCATAGGAGTTTTGTCTGCTTTAACCTTGATATTGTTGCTTTCTTTGTGTTCTGTAACATTGTACAAGAGGTACACTAATTTTGAAGCTCTTGAGGATTGGGAACTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCACACCGCAACGAAAGGTTTCAAGGAGAGTGAGCTAATTGGAGTTGGAGGCTTTGGTGCTGTCTACAAAGGTGTCTTACCTTCCACAGGAACTGAGGTTGCTGTGAAGAGGATTGTTCGGAGCCCAATCCAAGGAATGAGGGAATTCGCAGCTGAGATTGAAAGCTTAGGGAGGTTAAGGCACAAGAATTTAGTCAATCTTCAAGGATGGTGCAAGCGAAAGAATGATCTTCTTCTAATCTATGACTACATCCGTAACGGAAGCCTTGACTCACTTCTGTTCAAGCAAAGCCTTGTACTGAGCTGGGAGCAAAGGTTCAATATCATCAAAGGCATAGCGAATGGGCTGTTATATCTCCACGAAGAGTGGGAGCAAGTGGTGGTCCATAGAGACATCAAAACTAGCAATATCCTCATAGACGGAGATTTAAATGCTCGTTTGGGTGATTTTGGCCTCGCTAGGCTCTATGATCATGGTGAAGCATCGCACACAACCAATGTGGTTGGGACAATTGGGTACATAGCTCCAGAATTGACTCGCACAGGAAAGGCATCCACAAGCTCTGATGTGTATGCTTATGGTGTCTTGCTTCTTGAAGTTGTTAGCGGTAGGAGACCTATTGGGTCAGAACAATTCTTTTTGGTGGACTGGGTTGTGGAGAATTACAATATGGGTCAGATTCTTGAAGTGGTTGATCCTAAGTTGGGGTCAAATCATGTTGAGGAAGAGGTGGAATTGGTTCTGAAGCTGGGTCTTCTCTGTGCTCAACATAATGCAGAGTCAAGGCCCACCATGAGACAAGTGATGAGGTACCTGAACTTTGATGACCCTCTGCCAGATATTGGGGATTGGAGGAGACAAACAGATTCAGATAGTGGAAGAATGAGCCTGGGTTTCTTAGAAATTGTATCTTCAAGTGCCATCTCAACCGTAAATAACTCAACCTCTAATAGTAGCATAAATAGTAGGCCTATCCAAACCTGTAGATAG 2046 0.4467 MAASSLTLGFLLHLVLLSLLFAAKAQEVTQFSYEGFVNDGSLVLQEVAGITNDRMLMLTNTSNDVVGRAFHSKTIRMLNDSDDRQKASSFSTYFVFSIVSSTSGPGGFGLAFVLAPDIDMFVGAQAGHHLGIYSASNAVKETHIFAVEFDTVNGSDKGESDTEGNDVGINVNGTESGVSKPAAYYIGMDSKPVNFSMEKDEAVQAWIDYDGDNKTVNVTVAPVGVTKPSRPLISNRSINLTTVLNGEYMYAGFSASTGEASKASSHYILGWSFAVNAPAPPLDITKLPRPPPKVKDTSSFSWVNFAIGVLSALTLILLLSLCSVTLYKRYTNFEALEDWELDCPHRFRYRDLHTATKGFKESELIGVGGFGAVYKGVLPSTGTEVAVKRIVRSPIQGMREFAAEIESLGRLRHKNLVNLQGWCKRKNDLLLIYDYIRNGSLDSLLFKQSLVLSWEQRFNIIKGIANGLLYLHEEWEQVVVHRDIKTSNILIDGDLNARLGDFGLARLYDHGEASHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVLLLEVVSGRRPIGSEQFFLVDWVVENYNMGQILEVVDPKLGSNHVEEEVELVLKLGLLCAQHNAESRPTMRQVMRYLNFDDPLPDIGDWRRQTDSDSGRMSLGFLEIVSSSAISTVNNSTSNSSINSRPIQTCR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4760g00050 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Pral4760g00050 681 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
Pral4760g00050 681 Pfam Legume lectin domain 29 288 IPR001220 GO:0030246
Pral4760g00050 681 Gene3D Transferase(Phosphotransferase) domain 1 436 633 - -
Pral4760g00050 681 Pfam Protein kinase domain 359 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00050 681 CDD STKc_IRAK 365 625 - -
Pral4760g00050 681 ProSiteProfiles Protein kinase domain profile. 359 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00050 681 PANTHER - 23 626 - -
Pral4760g00050 681 CDD lectin_legume_LecRK_Arcelin_ConA 29 276 IPR001220 GO:0030246
Pral4760g00050 681 SUPERFAMILY Protein kinase-like (PK-like) 343 628 IPR011009 -
Pral4760g00050 681 FunFam Lectin-domain containing receptor kinase VI.3 344 435 - -
Pral4760g00050 681 Gene3D Phosphorylase Kinase; domain 1 344 435 - -
Pral4760g00050 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 292 IPR013320 -
Pral4760g00050 681 Gene3D - 25 278 - -
Pral4760g00050 681 FunFam L-type lectin-domain containing receptor kinase S.4 436 636 - -
Pral4760g00050 681 SMART serkin_6 359 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4760g00050 Pral-Chr4760 301116 303394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4760g00050 31 650 Receptor kinase-like Gene Family AT5G01560 50.553 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4760g00050 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4760g00050 - - gmx:100792854 795.808