Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4760g00049 ATGGCTTCATCATCATTAGCAGCAGCAGAAGCATCAACGCTTGGTTTCCTTCTGCTCCTTCTCCTTCTCTTTCTTTCTTTTCTGGTTGCGTCCAAGGCTCAGCAAGATACCCCATTTTTGTTTGAGGGATTCAATAACAGTGAAAATTATCTAAACCTTGAAGGAGCTACAGTTGTCAAAGCCAGTGGTTCGCTTAAACTCACCAACAGATCATACAATATTGTAGGCCATGCTTTCTATTACAAACCCTTTCAGATGCTTAATACAACCAATACAACCAAACAAAAAGTTTCTTCCTTTAGCACATCCTTTGTTTTCTCCATTGTCCCTTCAGCCTCTGGCCCTGGAGGCTTTGGCCTTGCTTTCGTCATAGCTCCCTCAACTCAATTTCCATGGTCAAGTCCTGGCCATCTTCTTGGTCTTGTTAACTCCTCCAATGATGGGAATCCATCAAATCACCTTTTTATAGTCGAATTTGATACGGTGAATGGCTACGGAAGTCAGGCTGACAGTAAAGGGAACCATATTGGAGTCAATATCAATGGCATGAACTCAAACGTCAATGAACCAGCTGCTTATTTTAAAGAAGGCACAGAAGCTCAGAAGGAAGAATTCATCATGGAGGAATCTGATGCTGTCCAAGCTTGGATAGATTATGATGGTGACGAGAAAATTGTGAACGTGACCATAGCTCCTGCGTCACTGCCCACCAAACCCTCCAAAGCACTCATATCCCGTTCGATTGACCTTCAGGAGGTTCTGAAGGACACCATGTATGTTGGTTTCTCAGCGTCAACTGGGGAAAGTAAAGCAAGCTCCCATTACATTCTGGGATGGAGCTTTTCAATGAATGGGCCTTCTGCTGCACTCAACAGGTCCAAGCTTCCAGAGCCACCACCAAAGGAGAATGATCCAAGTTCAACTTCTTTCCGTTGGGTCAACCTTGCCATTGGAGTTCTATCTGCTGTAATCATAATATTGTTGTTTTCCTTGTGTTCTGCAACATTGTACAGGAGGTACACCAATTTCGAGACTCTTGAGGATTGGGAACCAGATTGTCCTCACAGATTCAGATACAGAGATCTTCACATAGCAACAAAAGGATTCAGAGAGAGTGAGCTAATAGGAATGGGAGGTTGTGGTGCAGTATACAAAGGTGTCTTGTCTTCTAAAGGAAATGAGATTGCCGTGAAGAGGATCGTGCGAGGTCCAATCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTGAGACATAAAAACTTGGTCAATCTTCAAGGATGGTGCAAGCGAAAAAACGATCTTCTTCTAGTCTATGATTACATCTCCAATGGAAGCCTCGATTCACTCCTCTTCAATCCAAGCATTGTTTTGAGCTGGGATCAGAGGTTCAATATCATCAAAGGCATAGCTAATGGGATATTATATCTGCATGAAGACTGGGAGCAAGTGGTGATTCACAGAGACATCAAAACAGGTAATATTCTCATAGATGAGGACTTAAATGCTCGTGTAGGTGATTTTGGCCTTGCTAGGCTGTATGATCATGGTGAAGTATCTCACACAACCAATGTGGTTGGCACAATTGGGTATATAGCACCAGAATTAACTCGTACAGGAAAGGCATCGACAAACTCTGATGTGTATTCTTATGGGGTTTTGCTTCTTGAAGTTGTTAGTGGGAGGAGACCTGTTGAGTCAGGACAATTTTTCTTGTTAGATTGGGTTGTAGAGAATCACAGCTTGGGTCAGATTCTTGAAGTTGTTGACCCCAAGTTGAATTCAATGTATGATGAAGAAGAGGTGGAATTGGTTCTGAAACTGGGTCTTCTGTGTGCTCAACACAGAGCTGATTTAAGACCCACCATGAGACAAGTGACAAGATATCTAAACTTTGATGACCCTATTCCAGCTATTGGGGATTGGAGGGGACAAATCAATTCCGGAAGTAGCAGAGTCAGCTCTGGTTTCCTGGAAATTGTGTCTGCAGGTAATATGTCAACTTCGTATACTAACTTATCCTCCATTAATAGTATGAGCAGCAGATTTATAGAAGATGGCAGGTAG 2079 0.4271 MASSSLAAAEASTLGFLLLLLLLFLSFLVASKAQQDTPFLFEGFNNSENYLNLEGATVVKASGSLKLTNRSYNIVGHAFYYKPFQMLNTTNTTKQKVSSFSTSFVFSIVPSASGPGGFGLAFVIAPSTQFPWSSPGHLLGLVNSSNDGNPSNHLFIVEFDTVNGYGSQADSKGNHIGVNINGMNSNVNEPAAYFKEGTEAQKEEFIMEESDAVQAWIDYDGDEKIVNVTIAPASLPTKPSKALISRSIDLQEVLKDTMYVGFSASTGESKASSHYILGWSFSMNGPSAALNRSKLPEPPPKENDPSSTSFRWVNLAIGVLSAVIIILLFSLCSATLYRRYTNFETLEDWEPDCPHRFRYRDLHIATKGFRESELIGMGGCGAVYKGVLSSKGNEIAVKRIVRGPIQGMREFAAEIESLGRLRHKNLVNLQGWCKRKNDLLLVYDYISNGSLDSLLFNPSIVLSWDQRFNIIKGIANGILYLHEDWEQVVIHRDIKTGNILIDEDLNARVGDFGLARLYDHGEVSHTTNVVGTIGYIAPELTRTGKASTNSDVYSYGVLLLEVVSGRRPVESGQFFLLDWVVENHSLGQILEVVDPKLNSMYDEEEVELVLKLGLLCAQHRADLRPTMRQVTRYLNFDDPIPAIGDWRGQINSGSSRVSSGFLEIVSAGNMSTSYTNLSSINSMSSRFIEDGR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4760g00049 692 SMART serkin_6 369 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00049 692 FunFam L-type lectin-domain containing receptor kinase S.4 446 645 - -
Pral4760g00049 692 ProSiteProfiles Protein kinase domain profile. 369 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00049 692 Gene3D Transferase(Phosphotransferase) domain 1 446 638 - -
Pral4760g00049 692 Pfam Protein kinase domain 370 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00049 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Pral4760g00049 692 Pfam Legume lectin domain 38 296 IPR001220 GO:0030246
Pral4760g00049 692 CDD lectin_legume_LecRK_Arcelin_ConA 39 285 IPR001220 GO:0030246
Pral4760g00049 692 PANTHER - 27 636 - -
Pral4760g00049 692 FunFam L-type lectin-domain containing receptor kinase V.9 35 289 - -
Pral4760g00049 692 SUPERFAMILY Protein kinase-like (PK-like) 352 636 IPR011009 -
Pral4760g00049 692 Gene3D Phosphorylase Kinase; domain 1 354 445 - -
Pral4760g00049 692 Gene3D - 35 291 - -
Pral4760g00049 692 CDD STKc_IRAK 375 635 - -
Pral4760g00049 692 FunFam serine/threonine-protein kinase PBS1-like 338 445 - -
Pral4760g00049 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 300 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4760g00049 Pral-Chr4760 296285 298593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4760g00049 39 645 Receptor kinase-like Gene Family AT3G08870 52.760 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4760g00049 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4760g00049 - - gmx:100791358 882.093