Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4760g00048 ATGGCTTCTGCATCATCATCAACGCTTAGTTTCTTCCTCCTCTTTGTTTTACTCTCAGTTGTAGCCAAGGCCCAACGAGAGGCCACTTTTACCTACCCTGGATTCAGTAATATTAATGAAACTGAACTTATCCTCGAAGGAGCTACCATTATCAAATCCAGTGGTTTGCTTAGGCTCACCAACTCATCAAACAATATTGCAGGCCGCGTTTTCCACTCCCAGTCCATACAAATGCTTTCTAATTCAACCCCACACCGTAAAGCTTCTTCCTTCAGCACATCCTTCGTTTTTTCCATTGTCTCTTCGACCTCTGGGTCAGGAGGCTTTGGCCTTGCTTTCACCATCGCACCAAAAACCCATTTCCCAGAGGCGGAAGCTGAACACTTTCTTGGTCTCTTTAACCGCAGCAATGATGAGAACCCTTCGAACCACATATTTGCTGTTGAGTTTGATACGGTTAATGGCGCCGGTAAAGGTGAATCTGACACCAAAGGTGACCATATTGGGGTCAATCTAAATGGCGTAACCTCAGTCATTGACGAACCAGCTGCTTACGTTATTGAACAAGGCCCATATGCTCGAAAGAAGGAAAACATCAGTTTGGAGCAAGATGATGCTGTACAAGCTTGGATAGATTTTGATGGTGATGAGCAAACTGTGAATGTGACCATAGCTCCAATACGAGCACCTAAACCCTTCGAACCACTTATATCCAATCATCCCATCAACCTTGCTGGTAATTTAACGGAAAATGTATATGTTGGTTTCTCTGCATCAACAGGGAAGCATAAAGCAAGTTCTCATTACATTTTGGGGTGGAGCTTTGCAGTCAATGCACCTGCTCCTTCGCTTGACATTGAGAAACTTCCACGTCCACCACCAAAAGTGAAAGACACTTCCTCTTTTCCTTGGGTCAACTTTGCCATAGGAGTTTTGTCTGCTTTAACCTTGCTATTGCTGTTTTGTTTGTGTTCTGTAACATTGTACAAGAGGTACACCAATTTTGAAGCTCTTGAGGATTGGGAGCTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCACACCGCAACGAAAGGTTTCAAGGAGAGTGAGCTAATTGGAGTTGGAGGCTTTGGTGCTGTCTACAAAGGTGTCTTACCTTCCACAGGAACTGAGGTTGCTGTGAAGAGGATTGTTCGAAACCCAATCCAAGGAATGAGGGAATTCGCAGCTGAGATTGAAAGCTTAGGAAGATTAAGACACAAGAATTTAGTCAATCTTCAAGGATGGTGCAAGCAAGAAAATAACCTTCTTCTAGTATATGATTATATCCCCAATGGAAGTCTTGACTCACTCCTCTACAATCAAAGCTTTGTTTTGGATTGGGACCAAAGGTTCAATATCATCAAAGGCATAGCTAATGGACTATTGTATCTGCATGAAGAGTGGGAACAAGTCGTGGTCCATAGAGACATCAAAACCAGCAATATCCTCATAGATGGAGATTTTAATCCTCGTTTGGGTGATTTTGGCCTTGCTAGGCTGTATGATCATGGTGAAGTATCACGCACAACCAATGTGGTTGGGACAATTGGGTACATCGCACCAGAATTGACTCGCACAGGAAAGGCTTCTACATGTTCGGATGCGTATGCTTATGGGGTTTTGCTCCTTGAAGTAGTTAGCGGGAGAAGACCCATTGGCCCAGAACAATTCGTTTTGGTAGATTGGGTCATTGAGAATTACCGCTTGGGTCAGATTCTTGAAGTTATTGATCCAAACTTGAACTCAGTTTGTGCAGAAGAGGTGGAATTGGTTCTAAAACTGGGTCTTCTTTGTTCTCAATTTAATGCTGAGTCAAGGCCTACCATGAGACAGGTGACAAGGTACCTAAACTTTGATGATCCTCTTCCTAATATTGCTGGTATCCGGCACAAGTATTCTCTGAGCAGTAGAATGAGCTTGGATTTCTTAGAAGGTGAGAGTACCAGTGCAATCTCAACATCCCTTAATTTATCCTCCATTAACGACATGACTAGTATGTCTATAGAAGCAGGTAGATAG 2046 0.4311 MASASSSTLSFFLLFVLLSVVAKAQREATFTYPGFSNINETELILEGATIIKSSGLLRLTNSSNNIAGRVFHSQSIQMLSNSTPHRKASSFSTSFVFSIVSSTSGSGGFGLAFTIAPKTHFPEAEAEHFLGLFNRSNDENPSNHIFAVEFDTVNGAGKGESDTKGDHIGVNLNGVTSVIDEPAAYVIEQGPYARKKENISLEQDDAVQAWIDFDGDEQTVNVTIAPIRAPKPFEPLISNHPINLAGNLTENVYVGFSASTGKHKASSHYILGWSFAVNAPAPSLDIEKLPRPPPKVKDTSSFPWVNFAIGVLSALTLLLLFCLCSVTLYKRYTNFEALEDWELDCPHRFRYRDLHTATKGFKESELIGVGGFGAVYKGVLPSTGTEVAVKRIVRNPIQGMREFAAEIESLGRLRHKNLVNLQGWCKQENNLLLVYDYIPNGSLDSLLYNQSFVLDWDQRFNIIKGIANGLLYLHEEWEQVVVHRDIKTSNILIDGDFNPRLGDFGLARLYDHGEVSRTTNVVGTIGYIAPELTRTGKASTCSDAYAYGVLLLEVVSGRRPIGPEQFVLVDWVIENYRLGQILEVIDPNLNSVCAEEVELVLKLGLLCSQFNAESRPTMRQVTRYLNFDDPLPNIAGIRHKYSLSSRMSLDFLEGESTSAISTSLNLSSINDMTSMSIEAGR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4760g00048 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 294 IPR013320 -
Pral4760g00048 681 Gene3D Transferase(Phosphotransferase) domain 1 438 629 - -
Pral4760g00048 681 PANTHER - 47 627 - -
Pral4760g00048 681 FunFam Lectin-domain containing receptor kinase VI.3 346 437 - -
Pral4760g00048 681 ProSiteProfiles Protein kinase domain profile. 361 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00048 681 SMART serkin_6 361 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00048 681 Gene3D - 26 286 - -
Pral4760g00048 681 SUPERFAMILY Protein kinase-like (PK-like) 347 646 IPR011009 -
Pral4760g00048 681 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Pral4760g00048 681 Pfam Legume lectin domain 28 290 IPR001220 GO:0030246
Pral4760g00048 681 Gene3D Phosphorylase Kinase; domain 1 346 437 - -
Pral4760g00048 681 CDD lectin_legume_LecRK_Arcelin_ConA 30 278 IPR001220 GO:0030246
Pral4760g00048 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Pral4760g00048 681 FunFam L-type lectin-domain containing receptor kinase S.4 438 637 - -
Pral4760g00048 681 Pfam Protein kinase domain 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4760g00048 681 FunFam L-type lectin-domain containing receptor kinase V.9 27 280 - -
Pral4760g00048 681 CDD STKc_IRAK 367 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4760g00048 Pral-Chr4760 291025 293755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4760g00048 19 634 Receptor kinase-like Gene Family AT3G08870 53.016 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4760g00048 Pkinase 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4760g00048 - - gmx:100792854 810.831