Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4760g00040 ATGGCTACTATTCCCGTGGCTTACCAAGAGCACCTCCCTGCTGCTCCTGGTTGGCTAAACAAAGGAGATAACGGATGGCAGATGACAGCAGCCACACTAGTGGGTATCCAAAGCATGCCGGGGCTTGTGATTCTGTATGCAAGCATCGTCAAGAAGAAATGGGCTGTCAACTCCGCTTTCATGGCTCTCTATGCCTTCGCTGCTGTCCTCATCTGTTGGGTCCTTGTTGGTTTCAGAATGGCCTTTGGAGACCAACTCCTTCCCTTCTGGGGTAAGGGTGCGCCAGCTCTAGGCCAAAAGTTCCTCATAAATCGAGCCAAGGTCCCTGAAAGTACTCACTTTCACAAAAATGGCACTCTAGAAACCCCAACCGTAGAGCCGTTTTTTCCCATGGCTTCACTTGTGTATTTTCAATTCACTTTTGCTGCTATAACGCTTATCCTGCTAGCTGGTTCGGTTCTTGGTCGCATGAACATCAAGGCCTGGATGGCTTTTGTCCCCCTTTGGCTCATTTTCTCATACACCGTAGGGGCATTCAGCTTATGGGGCGGAGGCTTCCTCTACCAGTGGGGCGTCATGGATTACTCCGGCGGCTACGTAATCCACCTCTCCTCCGGAATTGCCGGCTTCACCGCCGCGTACTGGGTGGGACCGAGGCTGAAGAGCGACAGGGAGAGGTTTCCACCGAACAATGTGCTGCTGATGCTTGCGGGAGCGGGACTTCTATGGATGGGGTGGTCGGGGTTCAACGGCGGAGCTCCGTACGCGGCGAGCGTTGACTCGTCGATAGCGGTGTTGAACACCAACATATGTGCAGCGACGAGCCTTTTGATGTGGACGTCACTGGACGTCGTCTTCTTCGGGAAGCCTTCGGTGATCGGGGCCGTTCAGGGTATGATGACCGGACTGGTTTGCATCACCCCCGGCGCAGGGTTGGTGCAATCGTGGGCGGCTATAGTAATGGGAATCCTGTCGGGCAGCATTCCATGGGTCACCATGATGATCCTTCACAAAAAATCTTCTCTCCTCCAACAGGTTGATGACGCCCTGGGGGTGTTTCACACACACGCGGTGGCGGGGCTTCTGGGTGGCCTCCTCACTGGCCTCCTGGCAGAGCCCCAGCTCTGCCGGTTGACTTTGCCGGTGACCAATTCGAGGGGGGCCTTCTACGGCGGCAGCGGCGGCATTCAGTTCTTGAAGCAGATAGTGGGAGCCCTGTTTGTGACGGGATGGAACTTGGTGTCCACCTCTATCATTCTTCTGGCCATTCGTTTGTTTATACCGTTGAGGATGCCGGATGAGCAGCTCGAGATCGGCGATGACGCCGTGCACGGTGAGGAGGCCTACGCACTGTGGGGTGACGGAGAGAGATATGAACCTAACAAGCATGGTTCCTCATCAGACGTTCATGGTTCTGCAGTTTCACCTTACGTGAGTGGTGCAAGAGGCGTCACCATAAACTTGTAG 1467 0.5487 MATIPVAYQEHLPAAPGWLNKGDNGWQMTAATLVGIQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVGFRMAFGDQLLPFWGKGAPALGQKFLINRAKVPESTHFHKNGTLETPTVEPFFPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAASVDSSIAVLNTNICAATSLLMWTSLDVVFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVTMMILHKKSSLLQQVDDALGVFHTHAVAGLLGGLLTGLLAEPQLCRLTLPVTNSRGAFYGGSGGIQFLKQIVGALFVTGWNLVSTSIILLAIRLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGERYEPNKHGSSSDVHGSAVSPYVSGARGVTINL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4760g00040 488 FunFam Ammonium transporter 7 452 - -
Pral4760g00040 488 ProSitePatterns Ammonium transporters signature. 194 219 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pral4760g00040 488 Gene3D Ammonium transporter AmtB like domains 5 452 IPR029020 -
Pral4760g00040 488 SUPERFAMILY Ammonium transporter 18 431 - -
Pral4760g00040 488 PANTHER AMMONIUM TRANSPORTER MEP2 11 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pral4760g00040 488 NCBIfam ammonium transporter 23 449 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pral4760g00040 488 PRINTS Rhesus blood group protein signature 357 373 IPR002229 GO:0005886
Pral4760g00040 488 PRINTS Rhesus blood group protein signature 138 154 IPR002229 GO:0005886
Pral4760g00040 488 PRINTS Rhesus blood group protein signature 233 251 IPR002229 GO:0005886
Pral4760g00040 488 PRINTS Rhesus blood group protein signature 319 337 IPR002229 GO:0005886
Pral4760g00040 488 PRINTS Rhesus blood group protein signature 264 286 IPR002229 GO:0005886
Pral4760g00040 488 Pfam Ammonium Transporter Family 26 449 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4760g00040 Pral-Chr4760 257408 260982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4760g00040 131 488 Inorganic Solute Cotransporters AT2G38290 75.766 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4760g00040 K03320 - gmx:100790119 865.144