Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4760g00032 ATGGACGTCGACGAAACTTCTAAACCCAAAGAGGAAAAGCTCTTATTGGTCATGTTAGTGGGAGCACCAGGAAGCGGCAAGTCCACTTTCTGCGAAGAAGTTATGCGTTCTTCTACTCGTCCTTGGGTTCGTGTTTGCCAGGATGTCATTGGAAATGGAAAAGCAGGAAATAAAGCTCAATGTCTAAGCTGTGCTGCTGGAGCATTGAAGGATGGAAAGAATGTGTTTATTGACAGGTGCAATCTTGATAGAGAACAGCGTTCAGGATTCACAGAGCTTGGTGGACCCCAAATAGATGTGCATGCTGTTGTGCTTGATCTTCCTGCAAAGCTTTGTATTTCTCGATCTGTCAAACGAACTGGGCATGAAGGAAATTTACAGGGTGGAAAAGCTGCTGCAGTGGTGAATAGAATGCTTCAAAAGAAAGAGTTGCCTTCGTTAAGTGAAGGGTTTAACCGGATAACATTTTGTCAGACTGAGAGTGATGTCAAAGTGGCTATTAACACGTACAGCACACTTGGGCCACTGGATAAGCTTCCACATGGATGTTTTGGACAGAAAAGTAAAGATTCCAAAGTTCAAGTGGATATAATGAAGTTCTTTAAAAAGGCTGAGGTTCCAATTGTTGCTGAGTCTAGAGGGAATAGTGGTGGAAATTTTACTTCTCAAAATAATGAGATGATAGATCCCTGCCGTAAAGATATGGAAAAAGTTTCATCAAATTCAGATAAAGCCAACTTAGAGTCAGTGAATTTAGAAAATATCTCAGTTGGTTCCTCTGTTTCTAATGTTGATCATGCTTTCATGGATGATCCTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTTGACCATCAGAAGGCAGCTGAGATTATTGTAGAGAAAGTCGCAGAGTTCTCAAATAAGCTTGCGAATGCTAGATTTGTTTTAGTTGACTTGACTCATGGTTCAAAGATTCTGTCATTAGTTAAAGCCAAAGCTGCTCAAAAGAACTTAGACCCCAGAAAGTTTTTTACCCATGTTGGGGATATTACTTGCCTCAAGTCCACGGGAGGCTTGCACTGTGCTGTGATAGCTAATGCTGCCAACTGGCGATTGAAACCTGGAGGTGGAGGGGTCAATGCTGCAATTTTCAAGGCTGCTGGTCCTATCTTGGTGTCTGCAACCAAAGAACGAGCACAATTGCTCTTGCCTGGGCATGCTGTTGCTGTCCCTCTACCATCATCTTCTCCTTTGTTTACTAGGGAGGGAGTAACCCATGTAATACATGTTCTTGGGCCAAATATGAATCCACAAAGGCCAGATTGTCTCAATAATGACTACAATAAAGGCTGCAAGATTCTAAGGGAGGCTTACACTTCACTATTTGAAGCTTTTGCATCAATCCTGAGGACTGGGACAGAGCAAAAGAGCAAGAGAGATGCTGATCATGGATTTGAAAAAAGCAAGAAATACAAGGGAAGTCAGGATGATGTTGAAGGGAACGGAGCTGGTACCAAGGTTGTGAACATAGATCCAAGTAATAAAAAAAATGATGGCAGCTTGAATAAGACATGGGGATCATGGGCTCAAGCTCTTCATCAAATAGCTATGCGTCCTGAGGAGCATAAGAATGAATTGCTTGAAATATCCGAAGATGTAGTTGTGCTGAATGACCTGTATCCTAAGGCACAGAAGCATGTTTTGGTGTTGGCAAGAACTAGAGGCCTCGATTGCCTGGCTGATGTTCAAAATGACCATCTTCACTTGCTAAAGAGGATGCATTCTGTGGGTCTAAAGTGGGCCGAGAAGTTCTTGCATGAGAATGCTTCACTAGTTTTTCGTCTTGGATATCACTCGGTATGCAGTGCGTTTGTTTATGAATGGTTGCTTCCCCTTCTCTTTCTCTTAACAAGAAAAGAAAATAAATATTTGATGGGTATTCAACTGGGACTGGAAACTCTCCCCACAAGCTAA 1968 0.4217 MDVDETSKPKEEKLLLVMLVGAPGSGKSTFCEEVMRSSTRPWVRVCQDVIGNGKAGNKAQCLSCAAGALKDGKNVFIDRCNLDREQRSGFTELGGPQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPSLSEGFNRITFCQTESDVKVAINTYSTLGPLDKLPHGCFGQKSKDSKVQVDIMKFFKKAEVPIVAESRGNSGGNFTSQNNEMIDPCRKDMEKVSSNSDKANLESVNLENISVGSSVSNVDHAFMDDPPTLAFPSISTSDFQFDHQKAAEIIVEKVAEFSNKLANARFVLVDLTHGSKILSLVKAKAAQKNLDPRKFFTHVGDITCLKSTGGLHCAVIANAANWRLKPGGGGVNAAIFKAAGPILVSATKERAQLLLPGHAVAVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPDCLNNDYNKGCKILREAYTSLFEAFASILRTGTEQKSKRDADHGFEKSKKYKGSQDDVEGNGAGTKVVNIDPSNKKNDGSLNKTWGSWAQALHQIAMRPEEHKNELLEISEDVVVLNDLYPKAQKHVLVLARTRGLDCLADVQNDHLHLLKRMHSVGLKWAEKFLHENASLVFRLGYHSVCSAFVYEWLLPLLFLLTRKENKYLMGIQLGLETLPTS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4760g00032 655 SUPERFAMILY HIT-like 520 618 IPR036265 -
Pral4760g00032 655 PANTHER APRATAXIN-RELATED 275 620 - -
Pral4760g00032 655 Pfam Macro domain 363 438 IPR002589 -
Pral4760g00032 655 MobiDBLite consensus disorder prediction 474 517 - -
Pral4760g00032 655 Gene3D Leucine Aminopeptidase, subunit E, domain 1 320 467 IPR043472 -
Pral4760g00032 655 Gene3D - 2 171 IPR027417 -
Pral4760g00032 655 SUPERFAMILY Macro domain-like 274 316 IPR043472 -
Pral4760g00032 655 MobiDBLite consensus disorder prediction 474 494 - -
Pral4760g00032 655 Gene3D - 521 623 IPR036265 -
Pral4760g00032 655 SMART YBR022w_8 340 479 IPR002589 -
Pral4760g00032 655 Pfam Scavenger mRNA decapping enzyme C-term binding 531 619 - -
Pral4760g00032 655 ProSiteProfiles Macro domain profile. 328 655 IPR002589 -
Pral4760g00032 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 159 IPR027417 -
Pral4760g00032 655 Gene3D Leucine Aminopeptidase, subunit E, domain 1 213 316 IPR043472 -
Pral4760g00032 655 SUPERFAMILY Macro domain-like 323 461 IPR043472 -
Pral4760g00032 655 FunFam Transcription factor bHLH140 321 468 - -
Pral4760g00032 655 FunFam Transcription factor bHLH140 4 172 - -
Pral4760g00032 655 Pfam AAA domain 16 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4760g00032 Pral-Chr4760 211099 215260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4760g00032 5 620 C2H2 Transcription Factor Family AT5G01310 58.533 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4760g00032 K10863 - gmx:100786762 893.649