Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4758g00049 ATGCGCAAGTCTTTCAAGGATTCCCTCAAAGCTCTCGAAGCTGATATCCAGTTCGCCAATACTCTAGCTTCTGATTATCCAAGAGATTATGATGGTGCCTGCATCCAAATGAGATTGTCCTACAGTCCAGCAGCTCAATTTCTTCTTTTTCTGGTTCAGTGGACTGATTGTCACCTTGCTGGAGCGTTGGGATTGCTTAGAATTCTCATATACAAGGCATACGAGGATGGCAAGACAACAATGTCCATTTATGAAAGAAAAGCCAGTCTGAAGGAGTTCTATTGCGTGATCTTTCCCTCTTTATTGCAACTACACAGAGGAATTACGGATGTAGAAGACAGAAAACAAAAAGAAATATGTGCTAGTAAGTATAAGTCAAAACCTGTGGTCAGGAAAGGAAAGCATTCTGAAATTGACATGGAGAGAGAGGAAGAATGTGGTATTTGCATGGAGGTGAACAGCAAGATTGTATTGCCCACTTGCAATCACTCAATGTGCATGGAATGCTATCGAGATTGGCATGCACGATCTCAGTCTTGCCCTTTCTGCCGGGACAGTCTGAAAAGAGTGAACTCTGGTGACCTTTGGGTGTACATGAACAACAATGAGATAGATGACATGGCCTCAATCACAAAGGAGAATTTAAAGAGGTTATTCGTTTACATTGAAAAGTTGCCTCTTCTTGTTCCAGATCCAATATTCATGTCTCGTCCTGTCCGCTTGTGA 726 0.4215 MRKSFKDSLKALEADIQFANTLASDYPRDYDGACIQMRLSYSPAAQFLLFLVQWTDCHLAGALGLLRILIYKAYEDGKTTMSIYERKASLKEFYCVIFPSLLQLHRGITDVEDRKQKEICASKYKSKPVVRKGKHSEIDMEREEECGICMEVNSKIVLPTCNHSMCMECYRDWHARSQSCPFCRDSLKRVNSGDLWVYMNNNEIDDMASITKENLKRLFVYIEKLPLLVPDPIFMSRPVRL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4758g00049 241 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Pral4758g00049 241 SUPERFAMILY RING/U-box 136 189 - -
Pral4758g00049 241 SMART ring_2 146 183 IPR001841 -
Pral4758g00049 241 FunFam RING/U-box superfamily protein 128 193 - -
Pral4758g00049 241 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Pral4758g00049 241 Pfam Zinc finger, C3HC4 type (RING finger) 143 189 - -
Pral4758g00049 241 PANTHER RING FINGER PROTEIN 41, 151 3 235 - -
Pral4758g00049 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 213 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4758g00049 Pral-Chr4758 453683 457116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4758g00049 90 188 C3H Transcription Factor Family AT5G01960 29.808 3.39e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4758g00049 K25840 - pop:7466068 411.764