Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4758g00041 ATGCAGTTAAGAAGGTTTATCAACAATAGTGTTAGAGACTGGAAGAAAGCAATGATTGGAAATTGCTTCGGTGCCTTGAATTGGTGTAAACGTAAACGGAGGAATTATTCTGATGATCAGTCACGCGAACAAGTGATGTCAACTAAAAAGTTTAGTTATAATTCCTTAAGATCAGCAACAGGAGACTTTCATCCATCCAACAGAATTGGTAGAGGAGGTTATGGAGTTGTCTACAAGGGAGTTTTGCGGGATGGAACTCAAGTTGCTATCAAGTCTCTTTCTGTAGAGTCTAAGCAAGGAACAAGAGAATTTATGACAGAAATTGATACGATATCGAATATAAAACATCCAAACCTTGTGCAGCTAGTTGGCTGCTGTATAGAGGACAATCATCGCACATTGGTCTATGAATTTCTGGAAAACAATAGCCTTGCAAGCTCTTTGCTTGGTTCCAAAAGTAAATATGTAGCTCTAGATTGGCAAAAAAGGGCTACTATTTGCCGTGGTACAGCTTCTGCTCTTGCGTTTCTTCATGACGAGGTTCAGCCAAATATTGTTCATAGAGATATTAAGGCTAGCAACATACTGCTTGACGAGAACTTCAATCCCAAGATAGGGGACTTTGGCCTAGCAAAACTTTTTCCCGACAATGTCACCCATCTGAGTACTCGAGTGGCTGGAACTGTGGGATATCTTGCACCAGAATATGCACTTCTTGGACAGCTTACAAAAAAAGCAGATGTCTACAGTTTTGGCGTTCTCATGCTCGAAGTAATCAGTGGTAGAAGTAGCAGCAAAGCTGCATTTGGAGATAAGCTACTGGTTCTCGTGGAATGGATCTGGAAGCTGAAAGAAGAAAATAGGCTTCTGGACGTTGTTGATCCAGAACTAACTTCATATGATGAGACTGAGGTCATGCGTTTCATTAAGGTTGCTCTATTCTGTACCCAAGCAGCCGCTCATCACAGACCGACCATGAAGCAAGTTGTAGAAATGCTCTCCAAGGAAGTTCACCTTAATGAGAAGGCTTTGACGGAGCCTGGAGTTCATACATGGCATCGAGCCTCCAGAAATACTGTAAATTTTTCGGATGAGACATCAAGTTCTCAAGCGAACAAGTCTAAAAGACCTGAAAATTCACTCATAACCTCTAGCCAGTTTGGTGATTCTGATACTGTGACAGAGATGACTCCAAGATGA 1200 0.4158 MQLRRFINNSVRDWKKAMIGNCFGALNWCKRKRRNYSDDQSREQVMSTKKFSYNSLRSATGDFHPSNRIGRGGYGVVYKGVLRDGTQVAIKSLSVESKQGTREFMTEIDTISNIKHPNLVQLVGCCIEDNHRTLVYEFLENNSLASSLLGSKSKYVALDWQKRATICRGTASALAFLHDEVQPNIVHRDIKASNILLDENFNPKIGDFGLAKLFPDNVTHLSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVISGRSSSKAAFGDKLLVLVEWIWKLKEENRLLDVVDPELTSYDETEVMRFIKVALFCTQAAAHHRPTMKQVVEMLSKEVHLNEKALTEPGVHTWHRASRNTVNFSDETSSSQANKSKRPENSLITSSQFGDSDTVTEMTPR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4758g00041 399 CDD STKc_IRAK 69 335 - -
Pral4758g00041 399 FunFam cold-responsive protein kinase 1 33 138 - -
Pral4758g00041 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Pral4758g00041 399 SUPERFAMILY Protein kinase-like (PK-like) 38 333 IPR011009 -
Pral4758g00041 399 SMART serkin_6 63 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4758g00041 399 Gene3D Transferase(Phosphotransferase) domain 1 139 350 - -
Pral4758g00041 399 ProSiteProfiles Protein kinase domain profile. 63 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4758g00041 399 FunFam Putative LRR receptor-like serine/threonine-protein kinase 139 345 - -
Pral4758g00041 399 MobiDBLite consensus disorder prediction 355 399 - -
Pral4758g00041 399 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Pral4758g00041 399 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 47 371 - -
Pral4758g00041 399 Pfam Protein kinase domain 64 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4758g00041 399 Gene3D Phosphorylase Kinase; domain 1 25 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4758g00041 Pral-Chr4758 402249 405884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4758g00041 30 372 Receptor kinase-like Gene Family AT1G56120 48.991 4.23e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4758g00041 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4758g00041 - - gmx:100816683 554.673