Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4757g00014 ATGAGATCTGAGAAGGGATTTCGAATTCAGAGTCGAAGCCAGTCGAGGAAGGTGAAGTCACTATTCTTCTCAGTTCTTAGAGATGGTGAGCAGCATCATCATAGCATGGCAAGCACCAATCGGGACATGATAAAAGATATCAATAATAGTAAAGAGACCTGGACAATTGTTGCTCGAGTTCTTAGGAAGTGGGTTTCCTATAAGAAGGCTCCACCGTATGCTCCTTGGAGGATTGGAATGCTCCTTGTAGATGAGCAGGGTTCAAGAATAAAAGGTTTTGCAACACAAAAGGGCTTGATTGAGCGATACAAGAATGATCTTAAAGAGGGTAGAGTATACCACTGCGAAAACTTTCAGATAGTTGGCAATGATAACAAGTACAAAGTGACATCACATTCTTGGAGGCTTAAGTTCCACAACACAACATACTTTGAAGAATTGGATTTGCCTATTCCCAAAGAGTCTTTCAACTTCATCCCTATCAAGGATATTGCGGAATACACTGCAAAGAATGAAGGATTTATTGATGTCATCGGCTTCCTCCAGGCATTTGGGGATTTGAAAGACTTCAAAAACACATTTGGAACTTCGAAAACAATCACCCTGACTCTTTCTAATCAATATGAGAGCGCAATAAAGGTGGTATTGTTTGGTAACTGCGCGGTAAATACATATAATAGCAAGCCTCAAGGATCAAAGCATCCTATTATTGTGATGGTCAGATTTGGAAGGTTAAACAACCAACAAGCGTATGGGCATATTAGCAACGTGTTTGAAGCAACTAAAGTTTTGTTCAACCCTAACATTCCAGAGGCCCATGACCTACTTCAAAGCCTTGACGAAATACCTGAAGGTAGGCAGCACTTCTCTCAACTTTCCAGTGCAGATTACCAAGTTGTAGACAATGAGTCAATGCTAACATTTCCAATAAGAATACATGTGGCTGAACTCTCCACAATTACTGAGCCGTGTGAAGTTGTAACTAAGGTTTGCATCCAAAAGATTGAGATTGCTTACGGCTGGACCTATGATGGGTGCTCATGCGATCGCAAACCTGTATATGAAAATGACAAACTAAAATGCAAAAGCTATACGAATGATGTGTTGACTATTGAGCCCAAATTTAAGCTCCATTACACGGTGTTTGATTCAACGGGCATATGTTCAATCATATTTTTCAATCGTCTTGCTTGTGATTTGATTGGCTTCTCAGCTGAGCAGTTGAAGACAAAGGTAGCAAAGGACAAAAACCCAGGTTCTTTTCCGAAAGAATTGAGCAATTGTATGGGGAAAGAAATGATTGTCAAGCTAAAGATCAAAGAAAGCAATATTAGGTATCGAAATAGCAGTATGGGTGTTATCCAGTTCTCTACTGATAAAAAGATGCTGGAAAACTTTACGTACTCTGCTATCAAGGGAAGTCAACCTAATGAGTCTGAGAATATCACTCATGAGAAGGCTACAGTTGACACTTCATCATCACAACCAACAACATTGTTGTCATGTGGCATGCTGGACGTGGATAATGATCTCTTAAGATCTCAATTGCATGGCTCTCTGAACACATTGTCTAAGCGTAAAAAAAATCCGCTTGATTCATCAATTGATGATGACGAGACGAGATTGTCTGCCAACACAACTACAAAGTCCAGCTACGTGAAGCCATTGAAAAACATCAAAAAGGAGAAGGAAGATAAAGACTGA 1704 0.3996 MRSEKGFRIQSRSQSRKVKSLFFSVLRDGEQHHHSMASTNRDMIKDINNSKETWTIVARVLRKWVSYKKAPPYAPWRIGMLLVDEQGSRIKGFATQKGLIERYKNDLKEGRVYHCENFQIVGNDNKYKVTSHSWRLKFHNTTYFEELDLPIPKESFNFIPIKDIAEYTAKNEGFIDVIGFLQAFGDLKDFKNTFGTSKTITLTLSNQYESAIKVVLFGNCAVNTYNSKPQGSKHPIIVMVRFGRLNNQQAYGHISNVFEATKVLFNPNIPEAHDLLQSLDEIPEGRQHFSQLSSADYQVVDNESMLTFPIRIHVAELSTITEPCEVVTKVCIQKIEIAYGWTYDGCSCDRKPVYENDKLKCKSYTNDVLTIEPKFKLHYTVFDSTGICSIIFFNRLACDLIGFSAEQLKTKVAKDKNPGSFPKELSNCMGKEMIVKLKIKESNIRYRNSSMGVIQFSTDKKMLENFTYSAIKGSQPNESENITHEKATVDTSSSQPTTLLSCGMLDVDNDLLRSQLHGSLNTLSKRKKNPLDSSIDDDETRLSANTTTKSSYVKPLKNIKKEKEDKD 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4757g00014 567 Pfam Domain of unknown function DUF223 80 172 IPR003871 -
Pral4757g00014 567 CDD RPA1_DBD_B_like 176 280 - -
Pral4757g00014 567 Gene3D - 298 467 IPR012340 -
Pral4757g00014 567 Pfam Replication factor-A C terminal domain 340 443 IPR013955 -
Pral4757g00014 567 SUPERFAMILY Nucleic acid-binding proteins 323 445 IPR012340 -
Pral4757g00014 567 Gene3D - 43 148 IPR012340 -
Pral4757g00014 567 SUPERFAMILY Nucleic acid-binding proteins 43 147 IPR012340 -
Pral4757g00014 567 Gene3D - 150 287 IPR012340 -
Pral4757g00014 567 SUPERFAMILY Nucleic acid-binding proteins 155 280 IPR012340 -
Pral4757g00014 567 PANTHER OS03G0429900 PROTEIN 42 561 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pral4757g00014 567 CDD RPA1_DBD_A_like 55 142 - -
Pral4757g00014 567 MobiDBLite consensus disorder prediction 474 495 - -
Pral4757g00014 567 MobiDBLite consensus disorder prediction 524 567 - -
Pral4757g00014 567 MobiDBLite consensus disorder prediction 529 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4757g00014 Pral-Chr4757 86824 92064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4757g00014 36 463 Core DNA Replication Machinery Family AT5G08020 23.077 3.36e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4757g00014 - - pcin:129301944 347.436