Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4757g00006 ATGCTAAGCATGAGAAAACCTTCTTGCTTTGTTTTCATCTTTTTACTTCATTTCTTGATGATCTCTTTAGCTTGCAGTGGGGATGATATCACCACGGACAAATATGCACTTCTTGCTTTTAAATCCTTCGTTACTTTGGATCCATACAATTTCTTAGCAAGGTGGTCCATCTCTTCTTTCCCCTGCAATTGGATTGGTGTCACTTGCGATGCTCACCATAGAAGGGTCAAATCCTTACATCTTAGTGGTATGAATCTCATAGGTATCATATCTCCACAGCTAGGAAATCTCTCATCTCTTACTGAACTTGATCTTAGTAACAACAATTTTCATGGTCGTATACCGAAAGAACTGCTTCGATTACATAGATTGAAGTTGTTTAACTTGAGCTACAACGACTTTCATGGACAAGTTCCAACATGGATAGGAGCCTTATCTACACTTCAGGACTTGGATCTTTGTAATAACAGTTTTAGTGGATTTATTCCAACATCTTTATCTAATCTATCAAGGCTGGAGACTTTGGATTGGAATTTTAATTTCATTGAAGGGACCATTCCATCCGAAATCGGAAGTCTAAAGCATTTGAAGATTTTACGGCTTTCAAAGAACAAGCTTTCTGGAGCAATTCCTCAAACAATTTCCAACTTATCTTCTCTTGAAAGATTGAGTTTGTCTTATAACACTTTATCAGGAGGCCTTCCAAGGGAGATTGGTAATCTTCAACAGCTACAGATAATATATCTTTCAAATAATCAGTTTTCTAACTCTATACCAGCTTCCATATTTAATAATTCAATGATGCAGTACATTGAACTTAGCAACAATAACTTCTCTGGTAGCCTCCCAACAAATGTATGTTTTGGGCTTCCGAATCTTGCGAGACTTTATGCAAATGAAAATGATTTGTCTGGTCCAATACCTTCTATCTGGCATCAATGCAAAGAATTGCTAGAGTTAGATCTAAGCAATAACAGATTCAAGGGAGGAATCATCCCAATCGACATTGGAAATTTGACCAACCTCCAATTCTTATATCTGAGCAACAACAGCTTGCAAGGTGAAATTCCATTGTCTCTTTTCAATATTTCTTCATTGAGGGAAATAAGTCTAGGTCGAAACAATCTACAAGGTAATATTCCAATACCAATTGGCAATTGGGCGTTACTCGAAAGATTAGATCTCAGTTACAACTCCCTTACAGGCGAAATTCCAACATCTCTCTTCAACATTTCTTCATTAACGGTAGTGTATTTAACAAGCAACAATCTAAAAGGTAGACTACCATCATCAATCGGCAATTGCACGTTGCTGGAATATTTATATCTAGAAGAAAACTCCTTAACAGGAGAAATTCCACCATCTCTCTTCAGCAGTTCTTCTTTAAGAGAAGTATATTTAACAAGAAACAGATTAAATGGTAGTTTGCGAACGTCAACTGGCAATCAGACAATGCTGGAATATTTACATTTAGAAGACAACTCCTTTACAGGTGAAATTCCTCAATTTATTTTCAACGCACCTTCTTTGGGAGAGGTTTACCTTTCCAACAACCATTTCAACGGTAACTTGCCAGAAGAGATGTGCCATCAACTCCCTTTACTTGAAGTCTTTGGAGTTGTTAACAATCAATTAGATGGAAGTATTCCAAAATCAATAAGTAACTGTACATCATTGCTAGCCTTATATTTGGATTTGAACTCGTTTTCAGCTGCTTTGGAATATCTTCATCATGGTTCTTCTACACCAGTTGTTCATTGTGACATAAAACCAAGTAATATATTGTTGGATGAAGATATGGTAGCCCACCTTAGTGATTTTGGTATTGCCAAATTGCTAGGTGAGGGACAGATGGAAATTTATACCAAGACTTTGGCTACAATAGGCTACATGGCACCAGAGTATGGATCACAAGGAATTGTTTCCTTTCAAGGAGATGTATATAGTTATGGTATTTTGTTGATGGAAATGCTTACAAGAAAGAAACCTACAGATGAGATGTTTGTTCAAGGTATGAGTTTGAAAGACTGGGTTAGCAAATCAATGCCTCATTCCATCATTAATATTCTAGATGTCAATTTACTGCCAAAAGATGATCAAAATATTGGCAGCATATTGTCACATATATCATCACTTTTTGAGTTGGCCTTGCATTGTTGCATTGATTTACCTGGGGCAAGAATTAACATGAAGGATGTAGTGGTAACACTGAACAGAATCAAGGCCTCGTTTATAAAAGATATTAGAGACACCCCTAAATACTTGAATAATTATTAG 2277 0.3645 MLSMRKPSCFVFIFLLHFLMISLACSGDDITTDKYALLAFKSFVTLDPYNFLARWSISSFPCNWIGVTCDAHHRRVKSLHLSGMNLIGIISPQLGNLSSLTELDLSNNNFHGRIPKELLRLHRLKLFNLSYNDFHGQVPTWIGALSTLQDLDLCNNSFSGFIPTSLSNLSRLETLDWNFNFIEGTIPSEIGSLKHLKILRLSKNKLSGAIPQTISNLSSLERLSLSYNTLSGGLPREIGNLQQLQIIYLSNNQFSNSIPASIFNNSMMQYIELSNNNFSGSLPTNVCFGLPNLARLYANENDLSGPIPSIWHQCKELLELDLSNNRFKGGIIPIDIGNLTNLQFLYLSNNSLQGEIPLSLFNISSLREISLGRNNLQGNIPIPIGNWALLERLDLSYNSLTGEIPTSLFNISSLTVVYLTSNNLKGRLPSSIGNCTLLEYLYLEENSLTGEIPPSLFSSSSLREVYLTRNRLNGSLRTSTGNQTMLEYLHLEDNSFTGEIPQFIFNAPSLGEVYLSNNHFNGNLPEEMCHQLPLLEVFGVVNNQLDGSIPKSISNCTSLLALYLDLNSFSAALEYLHHGSSTPVVHCDIKPSNILLDEDMVAHLSDFGIAKLLGEGQMEIYTKTLATIGYMAPEYGSQGIVSFQGDVYSYGILLMEMLTRKKPTDEMFVQGMSLKDWVSKSMPHSIINILDVNLLPKDDQNIGSILSHISSLFELALHCCIDLPGARINMKDVVVTLNRIKASFIKDIRDTPKYLNNY 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4757g00006 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Pral4757g00006 758 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 190 286 - -
Pral4757g00006 758 Gene3D Ribonuclease Inhibitor 241 457 IPR032675 -
Pral4757g00006 758 SMART LRR_typ_2 339 363 IPR003591 -
Pral4757g00006 758 SMART LRR_typ_2 241 265 IPR003591 -
Pral4757g00006 758 SMART LRR_typ_2 193 216 IPR003591 -
Pral4757g00006 758 SMART LRR_typ_2 532 556 IPR003591 -
Pral4757g00006 758 SMART LRR_typ_2 97 121 IPR003591 -
Pral4757g00006 758 SMART LRR_typ_2 145 168 IPR003591 -
Pral4757g00006 758 SMART LRR_typ_2 217 240 IPR003591 -
Pral4757g00006 758 SMART LRR_typ_2 411 435 IPR003591 -
Pral4757g00006 758 SMART LRR_typ_2 436 459 IPR003591 -
Pral4757g00006 758 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Pral4757g00006 758 SUPERFAMILY L domain-like 290 575 - -
Pral4757g00006 758 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 542 750 - -
Pral4757g00006 758 PANTHER OS05G0588300 PROTEIN 359 480 - -
Pral4757g00006 758 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515
Pral4757g00006 758 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Pral4757g00006 758 SUPERFAMILY L domain-like 53 357 - -
Pral4757g00006 758 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Pral4757g00006 758 Pfam Leucine rich repeat 365 424 IPR001611 GO:0005515
Pral4757g00006 758 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 287 375 - -
Pral4757g00006 758 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 189 - -
Pral4757g00006 758 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 376 575 - -
Pral4757g00006 758 SUPERFAMILY Protein kinase-like (PK-like) 570 737 IPR011009 -
Pral4757g00006 758 Gene3D Ribonuclease Inhibitor 183 240 IPR032675 -
Pral4757g00006 758 Gene3D Ribonuclease Inhibitor 458 532 IPR032675 -
Pral4757g00006 758 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Pral4757g00006 758 Gene3D Transferase(Phosphotransferase) domain 1 563 753 - -
Pral4757g00006 758 Pfam Protein kinase domain 570 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4757g00006 758 SMART serkin_6 464 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4757g00006 758 ProSiteProfiles Protein kinase domain profile. 451 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4757g00006 Pral-Chr4757 13424 20474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4757g00006 570 753 Receptor kinase-like Gene Family AT5G20480 39.086 3.56e-31 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4757g00006 Pkinase 4.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4757g00006 - K13420 gmx:100784397 506.523