Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4757g00005 ATGCTAAGCATGAGAAAACCTTCTTGCTTTGTTTTCATCTTTTTACTTCATTTCTTGATGATCTCTTTAGCTTGCAGTGGGGATGATATCACCACGGACAAATATGCACTTCTTGCTTTTAAATCCTTCGTTACTTTGGATCCATACAATTTCTTAGCAAGGTGGTCCATCTCTTCTTTCCCCTGCAATTGGATTGGTGTCACTTGCGATGCTCACCATAGAAGGGTCAAATCCTTACATCTTAGTGGTATGAATCTCATAGGTATCATATCTCCACAGCTAGGAAATCTCTCATCTCTTACTGAACTTGATCTTAGTAACAACAATTTTCATGGTCGTATACCGAAAGAACTGCTTCGATTACATAGATTGAAGTTGTTTAACTTGAGCTACAACGACTTTCATGGACAAGTTCCAACATGGATAGGAGCCTTATCTACACTTCAGGACTTGGATCTTTGTAATAACAGTTTTAGTGGATTTATTCCAACATCTTTATCTAATCTATCAAGGCTGGAGACTTTGGATTGGAATTTTAATTTCATTGAAGGGACCATTCCATCCGAAATCGGAAGTCTAAAGCATTTGAAGATTTTACGGCTTTCAAAGAACAAGCTTTCTGGAGCAATTCCTCAAACAATTTCCAACTTATCTTCTCTTGAAAGATTGAGTTTGTCTTATAACACTTTATCAGGAGGCCTTCCAAGGGAGATTGGTAATCTTCAACAGCTACAGATAATATATCTTTCAAATAATCAGTTTTCTAACTCTATACCAGCTTCCATATTTAATAATTCAATGATGCAGTACATTGAACTTAGCAACAATAACTTCTCTGGTAGCCTCCCAACAAATGTATGTTTTGGGCTTCCGAATCTTGCGAGACTTTATGCAAATGAAAATGATTTGTCTGGTCCAATACCTTCTATCTGGCATCAATGCAAAGAATTGCTAGAGTTAGATCTAAGCAATAACAGATTCAAGGGAGGAATCATCCCAATCGACATTGGAAATTTGACCAACCTCCAATTCTTATATCTGAGCAACAACAGCTTGCAAGGTGAAATTCCATTGTCTCTTTTCAATATTTCTTCATTGAGGGAAATAAGTCTAGGTCGAAACAATCTACAAGGTAATATTCCAATACCAATTGGCAATTGGGCGTTACTCGAAAGATTAGATCTCAGTTACAACTCCCTTACAGGCGAAATTCCAACATCTCTCTTCAACATTTCTTCATTAACGGTAGTGTATTTAACAAGCAACAATCTAAAAGGTAGACTACCATCATCAATCGGCAATTGCACGTTGCTGGAATATTTATATCTAGAAGAAAACTCCTTAACAGGAGAAATTCCACCATCTCTCTTCAGCAGTTCTTCTTTAAGAGAAGTATATTTAACAAGAAACAGATTAAATGGTAGTTTGCGAACGTCAACTGGCAATCAGACAATGCTGGAATATTTACATTTAGAAGACAACTCCTTTACAGGTGAAATTCCTCAATTTATTTTCAACGCACCTTCTTTGGGAGAGGTTTACCTTTCCAACAACCATTTCAACGGTAACTTGCCAGAAGAGATGTGCCATCAACTCCCTTTACTTGAAGTCTTTGGAGTTGTTAACAATCAATTAGATGGAAGTATTCCAAAATCAATAAGTAACTGTACATCATTGCTAGCCTTATATTTGGATTTGAACTCGTTTTCAGGTTTTATACCCAAGGAGATAGCCAATCTTAATAAGCTTGAAGAGCTGGATTTCTCACCTGCTTTGGAATATCTTCATCATGGTTCTTCTACACCAGTTGTTCATTGTGACATAAAACCAAGTAATATATTGTTGGATGAAGATATGGTAGCCCACCTTAGTGATTTTGGTATTGCCAAATTGCTAGGTGAGGGACAGATGGAAATTTATACCAAGACTTTGGCTACAATAGGCTACATGGCACCAGAGTATGGATCACAAGGAATTGTTTCCTTTCAAGGAGATGTATATAGTTATGGTATTTTGTTGATGGAAATGCTTACAAGAAAGAAACCTACAGATGAGATGTTTGTTCAAGGTATGAGTTTGAAAGACTGGGTTAGCAAATCAATGCCTCATTCCATCATTAATATTCTAGATGTCAATTTACTGCCAAAAGATGATCAAAATATTGGCAGCATATTGTCACATATATCATCACTTTTTGAGTTGGCCTTGCATTGTTGCATTGATTTACCTGGGGCAAGAATTAACATGAAGGATGTAGTGGTAACACTGAACAGAATCAAGGCCTCGTTTATAAAAGATATTAGAGACACCCCTAAATACTTGAATAATTATTAG 2334 0.365 MLSMRKPSCFVFIFLLHFLMISLACSGDDITTDKYALLAFKSFVTLDPYNFLARWSISSFPCNWIGVTCDAHHRRVKSLHLSGMNLIGIISPQLGNLSSLTELDLSNNNFHGRIPKELLRLHRLKLFNLSYNDFHGQVPTWIGALSTLQDLDLCNNSFSGFIPTSLSNLSRLETLDWNFNFIEGTIPSEIGSLKHLKILRLSKNKLSGAIPQTISNLSSLERLSLSYNTLSGGLPREIGNLQQLQIIYLSNNQFSNSIPASIFNNSMMQYIELSNNNFSGSLPTNVCFGLPNLARLYANENDLSGPIPSIWHQCKELLELDLSNNRFKGGIIPIDIGNLTNLQFLYLSNNSLQGEIPLSLFNISSLREISLGRNNLQGNIPIPIGNWALLERLDLSYNSLTGEIPTSLFNISSLTVVYLTSNNLKGRLPSSIGNCTLLEYLYLEENSLTGEIPPSLFSSSSLREVYLTRNRLNGSLRTSTGNQTMLEYLHLEDNSFTGEIPQFIFNAPSLGEVYLSNNHFNGNLPEEMCHQLPLLEVFGVVNNQLDGSIPKSISNCTSLLALYLDLNSFSGFIPKEIANLNKLEELDFSPALEYLHHGSSTPVVHCDIKPSNILLDEDMVAHLSDFGIAKLLGEGQMEIYTKTLATIGYMAPEYGSQGIVSFQGDVYSYGILLMEMLTRKKPTDEMFVQGMSLKDWVSKSMPHSIINILDVNLLPKDDQNIGSILSHISSLFELALHCCIDLPGARINMKDVVVTLNRIKASFIKDIRDTPKYLNNY 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4757g00005 777 SUPERFAMILY L domain-like 288 589 - -
Pral4757g00005 777 Pfam Leucine rich repeat 365 424 IPR001611 GO:0005515
Pral4757g00005 777 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Pral4757g00005 777 Gene3D Ribonuclease Inhibitor 29 180 IPR032675 -
Pral4757g00005 777 SMART LRR_typ_2 339 363 IPR003591 -
Pral4757g00005 777 SMART LRR_typ_2 241 265 IPR003591 -
Pral4757g00005 777 SMART LRR_typ_2 193 216 IPR003591 -
Pral4757g00005 777 SMART LRR_typ_2 532 556 IPR003591 -
Pral4757g00005 777 SMART LRR_typ_2 97 121 IPR003591 -
Pral4757g00005 777 SMART LRR_typ_2 145 168 IPR003591 -
Pral4757g00005 777 SMART LRR_typ_2 217 240 IPR003591 -
Pral4757g00005 777 SMART LRR_typ_2 411 435 IPR003591 -
Pral4757g00005 777 SMART LRR_typ_2 436 459 IPR003591 -
Pral4757g00005 777 Gene3D Ribonuclease Inhibitor 239 458 IPR032675 -
Pral4757g00005 777 SUPERFAMILY Protein kinase-like (PK-like) 591 756 IPR011009 -
Pral4757g00005 777 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Pral4757g00005 777 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Pral4757g00005 777 SMART serkin_6 503 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4757g00005 777 ProSiteProfiles Protein kinase domain profile. 451 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4757g00005 777 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 189 - -
Pral4757g00005 777 Gene3D Transferase(Phosphotransferase) domain 1 590 772 - -
Pral4757g00005 777 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 286 380 - -
Pral4757g00005 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Pral4757g00005 777 Pfam Protein kinase domain 591 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4757g00005 777 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515
Pral4757g00005 777 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 384 591 - -
Pral4757g00005 777 SUPERFAMILY L domain-like 53 378 - -
Pral4757g00005 777 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 579 769 - -
Pral4757g00005 777 Gene3D Ribonuclease Inhibitor 531 589 IPR032675 -
Pral4757g00005 777 Gene3D Ribonuclease Inhibitor 459 530 IPR032675 -
Pral4757g00005 777 Gene3D Ribonuclease Inhibitor 181 238 IPR032675 -
Pral4757g00005 777 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 190 285 - -
Pral4757g00005 777 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 53 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4757g00005 Pral-Chr4757 13424 20474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4757g00005 586 772 Receptor kinase-like Gene Family AT5G20480 39.000 9.15e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4757g00005 Pkinase 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4757g00005 - K13420 gmx:100784397 508.449