Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00067 ATGGATTCTCGGGAGCCACCTCACTCATCGCCACCGTCCCGCTTACAACATCAACATTCATCAGCGCCACCAAACATTATGATACCTCCTGGTTCTTTCTCCTCCGCCATGCCCAACCCCATCCCTTCTTCCTTGATCAACCCCAATTCCTCGCCCATGCTGATGGCCCCTGCTACCGCCCGATTCCCCTTCACCACATTTGTATCACAATCCCGTTCTCCTCCTCCTCCTCCGCCTCCTCCGCCTCCATCGAAGCCTTCCGAACCTTTAAGCATCACTTCTCCCTACGAAGGCTCCTCCTCTGCGCTGAGGCCCTGCGGGTTGAGTTTTGATTGTCCGAAGAAGAAGAGAGGCCGGCCCAGGAAGTATTCGCCAGATGGTAGCATTGCTTTGGGTTTGGCTCCTACGCCTTTGTCTTCTTCTTCTGCCCCCGCTGATTTGAGTGCCACATCCGGGGAACCACCGGCTAAAAAGAGTAGGGGAAGGCCGCCGGGCTCTGGAAAGAAGCAACTGGATGCTCTTGGAGTTGGCGGGACAGGCTTTACTCCACATGTAATCATGGTGAAAACTGGGGAGGACATTGCAGCAAAGATTATGTCCTTTTGTGAACAAGGGCCACGTTCAGTCTGTATTCTTTCTGCTAATGGTGCAGTCTGCAATGCCACCATTCGACAGTCAGCTACATCAGGTGGTACAATGTACTACGAGGGTCGATATGAGATTATATCTATATCAGGTTCTTTCAATCCATGCGAAGACGGTGGTTGTAGAACAGGTGGTTTGAGTGTCACTCTTGCAGCGGCTGATGGAAAAATTGTCGGTGGTAGTGTTTCTGGAATGCTAGTTGCAGCATCACCAATACAGGTGATTGTGGGCAGCTTTATTGTGGAGGGGAAGAAAAAGTCGAGCTCAAAAAAGGAGATATCTGGGCCCTCCTCAGCAGCAACGCCCCCGGGAACTCAAATGCTAAATTTTGGTGCTTCATCTGTGACTCCAACCAGTGCTGCCTCTCAGGGAGTTTCAGGGGATTCTTCTGATGACCACAACGACAGTCCATCGCAGAGGGGATCTGGGTCTGGCACTGGGTCTGGGACTGAGCCTGGCCTCTATAGTAGTGTTAGCCAGCCCATTCATAATACGCAATGGAATCATCAACTATGGACCGGCCAAAATCCACAACGATGA 1185 0.5165 MDSREPPHSSPPSRLQHQHSSAPPNIMIPPGSFSSAMPNPIPSSLINPNSSPMLMAPATARFPFTTFVSQSRSPPPPPPPPPPSKPSEPLSITSPYEGSSSALRPCGLSFDCPKKKRGRPRKYSPDGSIALGLAPTPLSSSSAPADLSATSGEPPAKKSRGRPPGSGKKQLDALGVGGTGFTPHVIMVKTGEDIAAKIMSFCEQGPRSVCILSANGAVCNATIRQSATSGGTMYYEGRYEIISISGSFNPCEDGGCRTGGLSVTLAAADGKIVGGSVSGMLVAASPIQVIVGSFIVEGKKKSSSKKEISGPSSAATPPGTQMLNFGASSVTPTSAASQGVSGDSSDDHNDSPSQRGSGSGTGSGTEPGLYSSVSQPIHNTQWNHQLWTGQNPQR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00067 394 MobiDBLite consensus disorder prediction 134 148 - -
Pral4755g00067 394 CDD DUF296 182 294 IPR005175 -
Pral4755g00067 394 MobiDBLite consensus disorder prediction 9 28 - -
Pral4755g00067 394 ProSiteProfiles PPC domain profile profile. 178 317 IPR005175 -
Pral4755g00067 394 MobiDBLite consensus disorder prediction 307 394 - -
Pral4755g00067 394 Pfam Plants and Prokaryotes Conserved (PCC) domain 183 294 IPR005175 -
Pral4755g00067 394 MobiDBLite consensus disorder prediction 1 174 - -
Pral4755g00067 394 MobiDBLite consensus disorder prediction 301 394 - -
Pral4755g00067 394 MobiDBLite consensus disorder prediction 70 89 - -
Pral4755g00067 394 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 75 353 IPR039605 GO:0003680
Pral4755g00067 394 SUPERFAMILY AF0104/ALDC/Ptd012-like 180 295 - -
Pral4755g00067 394 SMART AT_hook_2 114 126 IPR017956 GO:0003677
Pral4755g00067 394 SMART AT_hook_2 157 169 IPR017956 GO:0003677
Pral4755g00067 394 MobiDBLite consensus disorder prediction 37 54 - -
Pral4755g00067 394 Gene3D - 183 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00067 Pral-Chr4755 350246 354309 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00067 107 326 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 55.242 4.92e-72 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00067 - - pcin:129322642 495.352