Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00064 ATGACTGGGACAGATATTGGCTTAATTAGTGATCTGACAGAGATTGCCGTCGCGTCTATGACCCAAAACCCACCAAATCAGCCAAACCCTGACGCCTCTACCTCTTCCTCCTCCATGTGGAATCCTGAAGAAGATGACTCATGGGAGGTCAGAGCTTTTGCAGAAGATACACGAAACATCATGGGCACCACTTGGCCTCCCAGGTCCTACACCTGCACCTTCTGCAGAAGGGAGTTCCGTTCTGCCCAAGCTCTCGGCGGTCACATGAACGTCCACCGCCGCGACCGGGCTCGTCTGCACCAAGTCCACCCCAACTCTTCCTTCACAGTCCCAGCACAAGACCTTGTTCCTAATAATGGATTGCGCCTTCTCTATCGTTTACCCGCAGCCCCTAATAATCCCACCTTTGCCTTCAGTAACACTACTGGTCCTACTCTCACTGATCCGAATGCATGTGCAGAATCACCTTCCACACTGCTCTCCATCTCGCCTTATCCAGCGAACAAGTTGGATTTTTCGGTGCTACGATCTGGCTGTAATATTTCGTCTTACTCTAATCAGTCCAGTGCCAAAGTGGAACTGCCCGCCAACGACTCCTCCAATGTTGGCCACGAAGAGCTTGATCTAGAGCTCCGGTTAGGCCACAGGCCAACACCGACCTGA 663 0.5219 MTGTDIGLISDLTEIAVASMTQNPPNQPNPDASTSSSSMWNPEEDDSWEVRAFAEDTRNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQVHPNSSFTVPAQDLVPNNGLRLLYRLPAAPNNPTFAFSNTTGPTLTDPNACAESPSTLLSISPYPANKLDFSVLRSGCNISSYSNQSSAKVELPANDSSNVGHEELDLELRLGHRPTPT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00064 220 PANTHER OS07G0101800 PROTEIN 39 217 - -
Pral4755g00064 220 SUPERFAMILY beta-beta-alpha zinc fingers 67 97 IPR036236 -
Pral4755g00064 220 SMART c2h2final6 70 92 IPR013087 -
Pral4755g00064 220 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Pral4755g00064 220 MobiDBLite consensus disorder prediction 20 43 - -
Pral4755g00064 220 Gene3D Classic Zinc Finger 61 112 - -
Pral4755g00064 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
Pral4755g00064 220 MobiDBLite consensus disorder prediction 20 46 - -
Pral4755g00064 220 Pfam C2H2-type zinc finger 70 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00064 Pral-Chr4755 320149 322733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00064 39 217 C2H2 Transcription Factor Family AT4G17810 43.147 4.00e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral4755g00064 zf-C2H2_6 4.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00064 - - pcin:129284523 342.428