Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00058 ATGGAGATTTCATCCAAGTACTTCGCAGAGCTGGATCCGAGCATGTTCGAGCAGTACCCAGTGGATTGTATGGCGTACGACGTTGATGACTTTCAGGATTTGTCGGGATGCGGCGACAGCTATTCATGTTTCGACTCCAAAAGAAGCCGTGATGAATGGCTCCCAGTGGAGAGTCCTGAACCTTTCGCCCAACAAAGACCAACCAAACAACTCAAGAGCACCAACAACACCAGCTGGGCCTCTTGCACCACCACAACAATGGCTGACCCCATCGCCCCTTCCAACAATTCTGCTTCTAATTCCACCTCCCAAATCATTTCTTTTGACAACTCCAATTCTTCCCCAGACGTCGCTTCTCACCAATTTCACAGCTTGGATTCTAGTCCTGTTGTCAAGCCTAAAAACGAGACTATTTTCTCCGCTGACCACTTGGATTTCATTGCTCCATTCTCCATTTCTCAGCCCACCTATGACCACAAATCTGATTCCTTTTTTCTCCCACATGAGAAAAAAACTGCCACCATTACCAGAAATCCCATCCAAGCTCAGGATCACGTCATGGCCGAAAGAAAACGAAGGGAGAAGCTCAGCCAGCGGTTTATTGCTCTTTCCGCCATTCTTCCTGGTCTCAAAAAGATGGATAAGGCTTCAGTCCTAGGAGATGCGATCAACTATGTGAAGCAACTGCAAGAGCGCGTGAAGATTCTGGAGGAACAGGTAGCCAAGAAAGCAGTGGAAACAGCGGTGTTTGTGAACAGGTCTGTTGCCTATGCCGACAATGATGGCTCCTCCTCCGGTGAAAATTCCAACGGCTGCTACGCCCAGCCACTGCCCGAAATCGAAGCGAGAGTTTCGGGCAAGGAGGTACTCATCAGAATCCACTGCGACAAACTCTATGGATCTGCCGCCACCATACTCTCCCAGTTACAACATCTCCATCTCACTGTCCAGAGCAGCAGCTTCTTGCCCTTCGGGGATGCCACTCTTGATGTTACTATTGTTGCTCAGATGAACAAGGAAGAGTGCGTGACAGCAAAGGATATAATAAGAAGCCTAAGGCAGGGACTGAGGCACTTAAATTAA 1083 0.4866 MEISSKYFAELDPSMFEQYPVDCMAYDVDDFQDLSGCGDSYSCFDSKRSRDEWLPVESPEPFAQQRPTKQLKSTNNTSWASCTTTTMADPIAPSNNSASNSTSQIISFDNSNSSPDVASHQFHSLDSSPVVKPKNETIFSADHLDFIAPFSISQPTYDHKSDSFFLPHEKKTATITRNPIQAQDHVMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAINYVKQLQERVKILEEQVAKKAVETAVFVNRSVAYADNDGSSSGENSNGCYAQPLPEIEARVSGKEVLIRIHCDKLYGSAATILSQLQHLHLTVQSSSFLPFGDATLDVTIVAQMNKEECVTAKDIIRSLRQGLRHLN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00058 360 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 229 IPR011598 GO:0046983
Pral4755g00058 360 PANTHER BHLH TRANSCRIPTION FACTOR 64 356 - -
Pral4755g00058 360 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 247 IPR036638 GO:0046983
Pral4755g00058 360 Coils Coil 219 246 - -
Pral4755g00058 360 SMART finulus 186 235 IPR011598 GO:0046983
Pral4755g00058 360 MobiDBLite consensus disorder prediction 63 77 - -
Pral4755g00058 360 CDD bHLH_AtNAI1_like 182 254 - -
Pral4755g00058 360 Gene3D - 173 244 IPR036638 GO:0046983
Pral4755g00058 360 MobiDBLite consensus disorder prediction 86 128 - -
Pral4755g00058 360 MobiDBLite consensus disorder prediction 58 77 - -
Pral4755g00058 360 Pfam Helix-loop-helix DNA-binding domain 183 230 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00058 Pral-Chr4755 278924 281220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00058 115 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.800 1.20e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4755g00058 HLH 6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00058 - - gmx:100798011 311.227