Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00057 ATGGAGATTTCAGCCAAGTACTTCGCCGAGCTAGATCCGAGCATGTTCGAGCAGTACCCAGTGGATTGTATGGCGTACGAGGTTGATGATTTTCAGGATTTGTCGGGCTGCGGCGACAGCTACTCATGTTTCCACTCCAAAAGAAGCCGTGATGAATGGTTCCCGGTGGAGAGTCCTGAATCTGTTGCCCAGCAAGGACCAGCCAAGCAACTCAAGAGCATCAACAACACCAGCTGGGCCGCTTGCACCACTACTACAACAGTGGCTGACCCCATCGTCCCTTCCAACCATTCTGCTTCTAATTCCACCTCCCAAATCATTTCTTTTGACAACTCTAATTCTTCCCCAGACGTCGCTTCTCACCAATTTTACAGCTTGGATTCTAGTACCGCTGTCAAGCCTAAAACCGAGACTATTTTCTCTGCTGACGACTTGGATTTCAGTGCGCCATTCTCCATTCTCAAACCCGCCTATGAACACAAACCTGATTCCTTTTGGCTCCCACATGAGAAAAAAACTGCCGCCCTTACCAGAAATCCCTTGCAAGCTAAAGATCACGTCATGGCCGAAAGAAAACGAAGGGAAAAGCTCTGCCAGCGGTTTATTGCTCTTTCCGCCATTCTTCCTGGTCTCAAAAAGATGGATAAGGCTTCAGTCCTAGGAGATGCAATCAACTATGTCAAACAGCTGCAGGAGCGCGTGCAGACTCTGGAGGAACAGGTAGCCAAGAAAGCAGTGGAAACCGCAGTGTTTGTGAACAGGTCTGTTGTTTATGCCGACGATGATGGCTCCTCCTCCGATGAAAATTCGAACGGCTGCGCCGACCAGTCACTGCCCGAAATCGAAGCGAGAGTTTCAGGAAAGGAGGTACTCATCAGAATCCACTGCGACAAGCGCTCTGGATCTGCCGCCACGATACTCTCCCAGTTACAACATCTCCATCTCACTGTCCAGAGCAGCAGCTTCTTGCCTTTCGGGAATACCACTCTTGATATCACTATTGTTGCTCAGATGAACAAGGAAGAGCGCGTAACGGCAAAGGATGTAGTGAGAAGCCTAAGGCAGGGTCTGAGGAACTTAATTTGA 1086 0.4945 MEISAKYFAELDPSMFEQYPVDCMAYEVDDFQDLSGCGDSYSCFHSKRSRDEWFPVESPESVAQQGPAKQLKSINNTSWAACTTTTTVADPIVPSNHSASNSTSQIISFDNSNSSPDVASHQFYSLDSSTAVKPKTETIFSADDLDFSAPFSILKPAYEHKPDSFWLPHEKKTAALTRNPLQAKDHVMAERKRREKLCQRFIALSAILPGLKKMDKASVLGDAINYVKQLQERVQTLEEQVAKKAVETAVFVNRSVVYADDDGSSSDENSNGCADQSLPEIEARVSGKEVLIRIHCDKRSGSAATILSQLQHLHLTVQSSSFLPFGNTTLDITIVAQMNKEERVTAKDVVRSLRQGLRNLI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00057 361 CDD bHLH_AtNAI1_like 183 255 - -
Pral4755g00057 361 Pfam Helix-loop-helix DNA-binding domain 185 231 IPR011598 GO:0046983
Pral4755g00057 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 230 IPR011598 GO:0046983
Pral4755g00057 361 SMART finulus 187 236 IPR011598 GO:0046983
Pral4755g00057 361 PANTHER BHLH TRANSCRIPTION FACTOR 66 357 - -
Pral4755g00057 361 Coils Coil 220 247 - -
Pral4755g00057 361 Gene3D - 174 245 IPR036638 GO:0046983
Pral4755g00057 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 186 248 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00057 Pral-Chr4755 269099 271170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00057 96 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.948 5.13e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4755g00057 HLH 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00057 - - gmx:100785572 309.301