Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00047 ATGGGGAGGGCTCCTTGCTGTGACAAAGCCAACGTGAAGAAAGGCCCATGGTCTCCAGAGGAAGACGCCAAGCTCAAGGCCTATATTGAGCAGCAGGGCACCGGCGGCAACTGGATTGCCTTGCCCCAAAAGATAGGCCTTAAGAGATGTGGGAAAAGCTGTCGCCTACGATGGTTGAATTATCTTCGCCCAAACATCAAGCATGGCGGTTTCTCCGAGGAAGAAGACAACATAATCTGCAGCCTCTATCTTACTATTGGAAGCAGGTGGTCAATAATAGCATCGCAATTACGAGGGAGAACAGATAATGATATAAAGAACTACTGGAACACTAGGTTGAGGAAGAAGCTGCTGGGTAAGCAGCGAAAGGAGCAGCAGGCCCAGGCTCGTCCAAACCTAGTCATGAAGAACGAAACTGAAAATTTGGTGACACCTGTGACCCAAAATCCCACCTGGCCAGCCCTCCTGTGCGTTCCAACATCTGTTTCCGCCCAACAGTATCATGATCCCAACCATGGCAGCTTGCCAAACAAAGCAGAGGGAACATTCTCACAGAATCACCAGCAATCATACTCAGACACACTTTCCCATACCATAAATTCCCACTACCCACTTCTCCATCAACTAGAACAGCAACTATACCCAACCTCAATAAATTCAGCAACGGCACCGCTGGCGAATAATAGTAGCAGCGGCAGTTGTCAGTCGTCGTCGAACATTCTCGAAGGCTTTGAAAGCTTCACTGATGATTACTGGAGTGAGTTGGTGGGTATGAGGCCGCAACAGCAACTAGATGCAGCGTTGCAGGGTTACTATGGAATGGGTAGCAGCGGTGCAGCTTCAACAGAAAGCACTAGCTGGGGTGATATCACCTCTCATCTGCAGGTTTACTCTCCTCTGATTTCTGGATACGAAAGTGTCCAACAAGGAACGCCTCACGATATCGCTTGTTTCGAGGAGTCTACTTACTATGGAGTGCAATAG 984 0.4888 MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQQGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYLTIGSRWSIIASQLRGRTDNDIKNYWNTRLRKKLLGKQRKEQQAQARPNLVMKNETENLVTPVTQNPTWPALLCVPTSVSAQQYHDPNHGSLPNKAEGTFSQNHQQSYSDTLSHTINSHYPLLHQLEQQLYPTSINSATAPLANNSSSGSCQSSSNILEGFESFTDDYWSELVGMRPQQQLDAALQGYYGMGSSGAASTESTSWGDITSHLQVYSPLISGYESVQQGTPHDIACFEESTYYGVQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00047 327 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pral4755g00047 327 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pral4755g00047 327 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pral4755g00047 327 PANTHER OS09G0431300 PROTEIN 1 265 - -
Pral4755g00047 327 Gene3D - 7 68 - -
Pral4755g00047 327 CDD SANT 71 113 IPR001005 -
Pral4755g00047 327 FunFam Transcription factor RAX3 7 68 - -
Pral4755g00047 327 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pral4755g00047 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pral4755g00047 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pral4755g00047 327 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pral4755g00047 327 CDD SANT 16 62 IPR001005 -
Pral4755g00047 327 SMART sant 13 64 IPR001005 -
Pral4755g00047 327 SMART sant 67 115 IPR001005 -
Pral4755g00047 327 Gene3D - 70 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00047 Pral-Chr4755 181346 183016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00047 1 135 MYB Transcription Factor Family AT5G65790 86.765 9.67e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4755g00047 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00047 K09422 - gmx:100812816 344.354