Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00044 ATGGGGACCTTGAGCTTAGACAGCATGACTTTCGCCAACCAATCCTCACGCCGAGAACTCAACAACCCAAACTATGTAAACCGCGTCGAACAAGGCCAAGACGTTCAGGTTCAGCCTTTCGCAACATACTATTCTGGCTTCACAAGTCAAGAAATGATGTTAGAAGGGCCCAAACAAAATGAGGTTTCAGACTGTAATGTCCAGGTCCCAAGTATTGCAGAGGAGGGAGTTTCTGGAATGAAGGGCTGGGGCATGAGAATCAACCCAGCTGGTCATGCATCGGAGTCAGAGATGATGGTTAGCGTAGAGGATAACAATGGTGGCGAGTCTGGATCCATTGGATCAATGGCGTATGGCGATTTGCAGTCACTGAGCTTGTCCATGAGCTCTGGCTCACAATCAAGCTGTGTCACAAGTTCACAGAGAGCATCGCCTTCTGTCATTGATTCTGTTGGCGTGGATACAAAGAAAAGAGGACCTGAAAAGTTTGACCAGAAGCAAATTATTCACAGGAAATCCATAGATACCTTTGGCCAAAGAACCTCCCAATACAGAGGTGTAACAAGACATAGATGGACTGGTAGATACGAAGCTCATCTTTGGGACAACAGTTGCAAGAAAGAGGGTCAAAGCAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGACCTGGCTGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCATTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATACGTGGCTCACTTGCGGAGGAAAAGCAGCGGATTCTCCAGAGGTGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGGCGGTGGCAAGCTCGAATCGGCAGAGTGGCTGGAAACAAGGATCTATATCTTGGAACCTTCAGTACCCAAGAGGAAGCAGCTGAGGCATATGACATTGCTGCTATAAAGTTCCGTGGAGTAAATGCGGTGACCAACTTCGATATAACGAGATATGATGTGGAAAGAATCATGGCTAGCAGTAACCTTCTTAGTGGCGAACTAGCCAGGCGGAACAAAGAGATAGATGGTGGCAACGATCGGGCTATCATCCCTATAGGTACAGCATATGTTGAAAACCAGGATGCGATTTCAATGCGCAAGAGTTTCGAAGGCCAGTCATCAGAGTGGAAGCCGGGAACGCATATGTTCAATCGTTCTCAGTGGATGACAGAACTTGACCAAAATCCAGCAAGAATTGAGACTTATAGAACTCAGTCCTTCTCAGTGCCTTTAGATAACATGATCCATCAAGTAGATGACCCGACCAATATGGGAACGCACGTCTCAAATCCTTCATCATTAGTGTCAAGCTTGAGCAGCTCACGTAAAGTTAGCCCTGATAAAACAAGCTTGCCAGTTCTCAGTGAAACGCCTTCGTTAGTGACAAGCTTGAGGCCTCCACTTTCATTGCCTCATGTGCCAGTTTTTGCTGCATGGACAGATGCTTGA 1536 0.4616 MGTLSLDSMTFANQSSRRELNNPNYVNRVEQGQDVQVQPFATYYSGFTSQEMMLEGPKQNEVSDCNVQVPSIAEEGVSGMKGWGMRINPAGHASESEMMVSVEDNNGGESGSIGSMAYGDLQSLSLSMSSGSQSSCVTSSQRASPSVIDSVGVDTKKRGPEKFDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVERIMASSNLLSGELARRNKEIDGGNDRAIIPIGTAYVENQDAISMRKSFEGQSSEWKPGTHMFNRSQWMTELDQNPARIETYRTQSFSVPLDNMIHQVDDPTNMGTHVSNPSSLVSSLSSSRKVSPDKTSLPVLSETPSLVTSLRPPLSLPHVPVFAAWTDA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00044 511 Coils Coil 250 270 - -
Pral4755g00044 511 CDD AP2 182 249 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 Pfam AP2 domain 286 335 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 Pfam AP2 domain 183 241 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 CDD AP2 284 345 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 FunFam AP2-like ethylene-responsive transcription factor 284 345 - -
Pral4755g00044 511 SUPERFAMILY DNA-binding domain 182 251 IPR016177 GO:0003677
Pral4755g00044 511 ProSiteProfiles AP2/ERF domain profile. 285 343 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 FunFam AP2-like ethylene-responsive transcription factor ANT 182 251 - -
Pral4755g00044 511 SUPERFAMILY DNA-binding domain 284 344 IPR016177 GO:0003677
Pral4755g00044 511 PRINTS Ethylene responsive element binding protein signature 325 345 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 PRINTS Ethylene responsive element binding protein signature 184 195 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 Gene3D AP2/ERF domain 285 345 IPR036955 GO:0003700|GO:0006355
Pral4755g00044 511 Gene3D AP2/ERF domain 182 251 IPR036955 GO:0003700|GO:0006355
Pral4755g00044 511 ProSiteProfiles AP2/ERF domain profile. 183 249 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 MobiDBLite consensus disorder prediction 449 482 - -
Pral4755g00044 511 SMART rav1_2 285 349 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 SMART rav1_2 183 255 IPR001471 GO:0003700|GO:0006355
Pral4755g00044 511 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 105 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00044 Pral-Chr4755 145486 149319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00044 111 511 AP2-EREBP Transcription Factor Family AT4G37750 56.351 6.58e-147 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pral4755g00044 AP2 8.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00044 K09285 - gmx:100787611 622.083