Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00043 ATGAAGTCCGCGGAGAATGATGACACCCATGGTCATGAAAACAACTGGTTGGGTTTCTCTCTCTCCCCTCACATGAATCTAGATGTTCCTTCCCACTGTAATGATCAACAAGGCAAACAAGTTACACGGCCTTCCTCTGCCGCTGCAGATGCAGTTCCGGCGAGCTTCTATCACTCCATGCCCCTTCCTCCTAATTATGGCATTTATTATGGTGCTCTTGAAGGTGAAAATGCCGCCTTCTATTCATCTCTTCCTGTCATGCCCCTGAAATCTGACGGCTCTCTCTATCTAATGCAGTCACAACCTCAAGGAATGGTATCGACTTCAGCCCCGAAACTCGAGAATTTCTTGGGCAGCTCAACAATGGGGACCTTGAGCTTAGACAGCATGACTTTCGCCAACCAATCCTCACGCCGAGAACTCAACAACCCAAACTATGTAAACCGCGTCGAACAAGGCCAAGACGTTCAGGTTCAGCCTTTCGCAACATACTATTCTGGCTTCACAAGTCAAGAAATGATGTTAGAAGGGCCCAAACAAAATGAGGTTTCAGACTGTAATGTCCAGGTCCCAAGTATTGCAGAGGAGGGAGTTTCTGGAATGAAGGGCTGGGGCATGAGAATCAACCCAGCTGGTCATGCATCGGAGTCAGAGATGATGGTTAGCGTAGAGGATAACAATGGTGGCGAGTCTGGATCCATTGGATCAATGGCGTATGGCGATTTGCAGTCACTGAGCTTGTCCATGAGCTCTGGCTCACAATCAAGCTGTGTCACAAGTTCACAGAGAGCATCGCCTTCTGTCATTGATTCTGTTGGCGTGGATACAAAGAAAAGAGGACCTGAAAAGTTTGACCAGAAGCAAATTATTCACAGGAAATCCATAGATACCTTTGGCCAAAGAACCTCCCAATACAGAGGTGTAACAAGACATAGATGGACTGGTAGATACGAAGCTCATCTTTGGGACAACAGTTGCAAGAAAGAGGGTCAAAGCAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGACCTGGCTGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCATTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATACGTGGCTCACTTGCGGAGGAAAAGCAGCGGATTCTCCAGAGGTGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGGCGGTGGCAAGCTCGAATCGGCAGAGTGGCTGGAAACAAGGATCTATATCTTGGAACCTTCAGTACCCAAGAGGAAGCAGCTGAGGCATATGACATTGCTGCTATAAAGTTCCGTGGAGTAAATGCGGTGACCAACTTCGATATAACGAGATATGATGTGGAAAGAATCATGGCTAGCAGTAACCTTCTTAGTGGCGAACTAGCCAGGCGGAACAAAGAGATAGATGGTGGCAACGATCGGGCTATCATCCCTATAGGTACAGCATATGTTGAAAACCAGGATGCGATTTCAATGCGCAAGAGTTTCGAAGGCCAGTCATCAGAGTGGAAGCCGGGAACGCATATGTTCAATCGTTCTCAGTGGATGACAGAACTTGACCAAAATCCAGCAAGAATTGAGACTTATAGAACTCAGTCCTTCTCAGTGCCTTTAGATAACATGATCCATCAAGTAGATGACCCGACCAATATGGGAACGCACGTCTCAAATCCTTCATCATTAGTGTCAAGCTTGAGCAGCTCACGTAAAGTTAGCCCTGATAAAACAAGCTTGCCAGTTCTCAGTGAAACGCCTTCGTTAGTGACAAGCTTGAGGCCTCCACTTTCATTGCCTCATGTGCCAGTTTTTGCTGCATGGACAGATGCTTGA 1899 0.465 MKSAENDDTHGHENNWLGFSLSPHMNLDVPSHCNDQQGKQVTRPSSAAADAVPASFYHSMPLPPNYGIYYGALEGENAAFYSSLPVMPLKSDGSLYLMQSQPQGMVSTSAPKLENFLGSSTMGTLSLDSMTFANQSSRRELNNPNYVNRVEQGQDVQVQPFATYYSGFTSQEMMLEGPKQNEVSDCNVQVPSIAEEGVSGMKGWGMRINPAGHASESEMMVSVEDNNGGESGSIGSMAYGDLQSLSLSMSSGSQSSCVTSSQRASPSVIDSVGVDTKKRGPEKFDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVERIMASSNLLSGELARRNKEIDGGNDRAIIPIGTAYVENQDAISMRKSFEGQSSEWKPGTHMFNRSQWMTELDQNPARIETYRTQSFSVPLDNMIHQVDDPTNMGTHVSNPSSLVSSLSSSRKVSPDKTSLPVLSETPSLVTSLRPPLSLPHVPVFAAWTDA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00043 632 CDD AP2 405 466 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 SMART rav1_2 406 470 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 SMART rav1_2 304 376 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 Coils Coil 371 391 - -
Pral4755g00043 632 MobiDBLite consensus disorder prediction 27 47 - -
Pral4755g00043 632 PRINTS Ethylene responsive element binding protein signature 446 466 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 PRINTS Ethylene responsive element binding protein signature 305 316 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 SUPERFAMILY DNA-binding domain 405 465 IPR016177 GO:0003677
Pral4755g00043 632 MobiDBLite consensus disorder prediction 570 603 - -
Pral4755g00043 632 Gene3D AP2/ERF domain 406 466 IPR036955 GO:0003700|GO:0006355
Pral4755g00043 632 Gene3D AP2/ERF domain 303 372 IPR036955 GO:0003700|GO:0006355
Pral4755g00043 632 CDD AP2 303 370 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 SUPERFAMILY DNA-binding domain 303 372 IPR016177 GO:0003677
Pral4755g00043 632 MobiDBLite consensus disorder prediction 27 44 - -
Pral4755g00043 632 FunFam AP2-like ethylene-responsive transcription factor ANT 303 372 - -
Pral4755g00043 632 FunFam AP2-like ethylene-responsive transcription factor 405 466 - -
Pral4755g00043 632 ProSiteProfiles AP2/ERF domain profile. 304 370 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 ProSiteProfiles AP2/ERF domain profile. 406 464 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 108 496 - -
Pral4755g00043 632 Pfam AP2 domain 304 362 IPR001471 GO:0003700|GO:0006355
Pral4755g00043 632 Pfam AP2 domain 407 456 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00043 Pral-Chr4755 145168 149319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00043 232 632 AP2-EREBP Transcription Factor Family AT4G37750 56.351 2.08e-145 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pral4755g00043 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00043 K09285 - gmx:100792451 740.339