Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00042 ATGAAGTCCGCGGAGAATGATGACACCCATGGTCATGAAAACAACTGGTTGGGTTTCTCTCTCTCCCCTCACATGAATCTAGATGTTCCTTCCCACTGTAATGATCAACAAGGCAAACAAGTTACACGGCCTTCCTCTGCCGCTGCAGATGCAGTTCCGGCGAGCTTCTATCACTCCATGCCCCTTCCTCCTAATTATGGCATTTATTATGGTGCTCTTGAAGGTGAAAATGCCGCCTTCTATTCATCTCTTCCTGTCATGCCCCTGAAATCTGACGGCTCTCTCTATCTAATGCAGTCACAACCTCAAGGAATGGTATCGACTTCAGCCCCGAAACTCGAGAATTTCTTGGGCAGCTCAACAATGGGGACCTTGAGCTTAGACAGCATGACTTTCGCCAACCAATCCTCACGCCGAGAACTCAACAACCCAAACTATGTAAACCGCGTCGAACAAGGCCAAGACGTTCAGGTCCCAAGTATTGCAGAGGAGGGAGTTTCTGGAATGAAGGGCTGGGGCATGAGAATCAACCCAGCTGGTCATGCATCGGAGTCAGAGATGATGGTTAGCGTAGAGGATAACAATGGTGGCGAGTCTGGATCCATTGGATCAATGGCGTATGGCGATTTGCAGTCACTGAGCTTGTCCATGAGCTCTGGCTCACAATCAAGCTGTGTCACAAGTTCACAGAGAGCATCGCCTTCTGTCATTGATTCTGTTGGCGTGGATACAAAGAAAAGAGGACCTGAAAAGTTTGACCAGAAGCAAATTATTCACAGGAAATCCATAGATACCTTTGGCCAAAGAACCTCCCAATACAGAGGTGTAACAAGACATAGATGGACTGGTAGATACGAAGCTCATCTTTGGGACAACAGTTGCAAGAAAGAGGGTCAAAGCAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGACCTGGCTGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCATTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATACGTGGCTCACTTGCGGAGGAAAAGCAGCGGATTCTCCAGAGGTGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGGCGGTGGCAAGCTCGAATCGGCAGAGTGGCTGGAAACAAGGATCTATATCTTGGAACCTTCAGTACCCAAGAGGAAGCAGCTGAGGCATATGACATTGCTGCTATAAAGTTCCGTGGAGTAAATGCGGTGACCAACTTCGATATAACGAGATATGATGTGGAAAGAATCATGGCTAGCAGTAACCTTCTTAGTGGCGAACTAGCCAGGCGGAACAAAGAGATAGATGGTGGCAACGATCGGGCTATCATCCCTATAGGTACAGCATATGTTGAAAACCAGGATGCGATTTCAATGCGCAAGAGTTTCGAAGGCCAGTCATCAGAGTGGAAGCCGGGAACGCATATGTTCAATCGTTCTCAGTGGATGACAGAACTTGACCAAAATCCAGCAAGAATTGAGACTTATAGAACTCAGTCCTTCTCAGTGCCTTTAGATAACATGATCCATCAAGTAGATGACCCGACCAATATGGGAACGCACGTCTCAAATCCTTCATCATTAGTGTCAAGCTTGAGCAGCTCACGTAAAGTTAGCCCTGATAAAACAAGCTTGCCAGTTCTCAGTGAAACGCCTTCGTTAGTGACAAGCTTGAGGCCTCCACTTTCATTGCCTCATGTGCCAGTTTTTGCTGCATGGACAGATGCTTGA 1803 0.4676 MKSAENDDTHGHENNWLGFSLSPHMNLDVPSHCNDQQGKQVTRPSSAAADAVPASFYHSMPLPPNYGIYYGALEGENAAFYSSLPVMPLKSDGSLYLMQSQPQGMVSTSAPKLENFLGSSTMGTLSLDSMTFANQSSRRELNNPNYVNRVEQGQDVQVPSIAEEGVSGMKGWGMRINPAGHASESEMMVSVEDNNGGESGSIGSMAYGDLQSLSLSMSSGSQSSCVTSSQRASPSVIDSVGVDTKKRGPEKFDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVERIMASSNLLSGELARRNKEIDGGNDRAIIPIGTAYVENQDAISMRKSFEGQSSEWKPGTHMFNRSQWMTELDQNPARIETYRTQSFSVPLDNMIHQVDDPTNMGTHVSNPSSLVSSLSSSRKVSPDKTSLPVLSETPSLVTSLRPPLSLPHVPVFAAWTDA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00042 600 CDD AP2 373 434 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 SUPERFAMILY DNA-binding domain 271 340 IPR016177 GO:0003677
Pral4755g00042 600 MobiDBLite consensus disorder prediction 27 47 - -
Pral4755g00042 600 CDD AP2 271 338 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 MobiDBLite consensus disorder prediction 538 571 - -
Pral4755g00042 600 Coils Coil 339 359 - -
Pral4755g00042 600 SUPERFAMILY DNA-binding domain 373 433 IPR016177 GO:0003677
Pral4755g00042 600 SMART rav1_2 374 438 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 SMART rav1_2 272 344 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 MobiDBLite consensus disorder prediction 27 44 - -
Pral4755g00042 600 FunFam AP2-like ethylene-responsive transcription factor 373 434 - -
Pral4755g00042 600 Pfam AP2 domain 272 330 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 Pfam AP2 domain 375 424 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 ProSiteProfiles AP2/ERF domain profile. 272 338 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 107 464 - -
Pral4755g00042 600 PRINTS Ethylene responsive element binding protein signature 273 284 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 PRINTS Ethylene responsive element binding protein signature 414 434 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 Gene3D AP2/ERF domain 271 340 IPR036955 GO:0003700|GO:0006355
Pral4755g00042 600 Gene3D AP2/ERF domain 374 434 IPR036955 GO:0003700|GO:0006355
Pral4755g00042 600 ProSiteProfiles AP2/ERF domain profile. 374 432 IPR001471 GO:0003700|GO:0006355
Pral4755g00042 600 FunFam AP2-like ethylene-responsive transcription factor ANT 271 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00042 Pral-Chr4755 145167 149320 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00042 1 600 AP2-EREBP Transcription Factor Family AT4G37750 46.483 2.42e-157 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pral4755g00042 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00042 K09285 - gmx:100792451 705.286