Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4755g00005 ATGCGTTCAAATGTAGATCTAAAGGATAAATGGAGGAATATAAATGTGACTGCAATATGGGGATCCAGACAGAAGGCAAAACTTGCGCTTAAAAGGAACCTACCAAACCCCAAAAATGATAACAACCATATGGCATTGAGTACTGCTGTTCAACATGGTGAAGAAGTTCTTGATACTAAGCCTCTGGCAGTTGCTGGCGGAATGCCACAGTCTGCTAATCCTAAAGAACAAATATCTAGGTTGGATAATCTTATATTAGAGGCCATAATCAATTTGAAGGAGCCGAAGGGTACTGACAGGGCTGCTATTGCTGCTTACATAGAGGAGCATTATTGTTCTCCACCGAACCTCAGAAAGTTATTGTCAATGAAACTGAAGCATATGGTGGCTAGTGGCAAATTGACTAAGGTAAAACACAAATACAGGATCACTCAAAATTCTGCAATCTCTGAGAAAAGAAGACACTCTAACTTGTTACTCCTGGAAGGGAGGCCCAAAGATTCCCCAAAAGCGGAGAAGACCAATGTCAACATCCTTTCGAAATCCCAGATTGACGCAGAGCTATCAAAAATGAAGGGCGTGACAGCCCAAGAAGCTGCTGCAGCTGCTGCAAAGGCGGTTGCTGAAGCAGAAGCTGCAATTGCTGAGGCGGAGGCTGCAGCTAGGGAGGCGGAAGCTGCAGAAGCTGAGGCTGAGGCTGCACAAGTGTTTGCAAAAGCAGCAATGAAAGCACTAAAATGCAGAGCACTGCAAATTTGA 759 0.444 MRSNVDLKDKWRNINVTAIWGSRQKAKLALKRNLPNPKNDNNHMALSTAVQHGEEVLDTKPLAVAGGMPQSANPKEQISRLDNLILEAIINLKEPKGTDRAAIAAYIEEHYCSPPNLRKLLSMKLKHMVASGKLTKVKHKYRITQNSAISEKRRHSNLLLLEGRPKDSPKAEKTNVNILSKSQIDAELSKMKGVTAQEAAAAAAKAVAEAEAAIAEAEAAAREAEAAEAEAEAAQVFAKAAMKALKCRALQI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4755g00005 252 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 77 145 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral4755g00005 252 Pfam linker histone H1 and H5 family 82 139 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral4755g00005 252 SUPERFAMILY "Winged helix" DNA-binding domain 76 154 IPR036390 -
Pral4755g00005 252 Coils Coil 200 237 - -
Pral4755g00005 252 PANTHER SINGLE MYB HISTONE 4 2 248 IPR044597 GO:0003691
Pral4755g00005 252 SMART h15plus2 75 140 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral4755g00005 252 CDD H15 83 140 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pral4755g00005 252 Gene3D - 73 155 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4755g00005 Pral-Chr4755 34042 44769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4755g00005 2 248 Single Myb Histone (SMH) Gene Family AT5G67580 54.400 5.28e-58 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4755g00005 K09422 - gmx:778165 308.145