Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4754g00050 ATGGATCAATTTATAGATGAACGCTTTACAAGAGTGCGATCTAAGAACTCGTCAAGAGAAGCTCTTGAAAAATGGAGGAACGTATGCGGTGTAGTGAAGAACCGCAAACGACGGTTTCGTTTCACTGCCAATCTCTCCAAGCGAGACGAAGTGGCTGCTATGCGTCGTACCAACCAGGAGAAGCTGAGGGTTGCTGTTCTAGTCTCCAAAGCGGCTCTTCAATTTATTCAAGGTGTGCCACAAAGTGACTATGTTGTACCCGAGAATGTTAAAGCAGAAGGTTTTCAGATCTGTGCCGAAGAATTGGGGTCTATTGTTGAAGGTCATGATATAAAGAAGCTGAAATATCATGGCGGGGTTAATGGTCTTGCAGGCAAGCTTTCGGCTTCAATCACTGATGGCCTCAGCAATGACCCTGATCTTCTTAACAAGAGACAAAAGATTTATGGAATCAACAAATTTACTGAGAGTGAGGCTCGGAGTTTCTGGGTTTTTGTTTGGGAAGCCCTCCAAGACATGACTCTCATGATCCTTGGTGTATGCGCTCTTGTGTCTCTCATAGTTGGCATAGCAATGGAAGGATGGCCCCATGGTGCCCATGATGGTCTTGGAATTGTTGCAAGTATCTTGCTGGTTGTCTTTGTGACAGCAACAAGTGATTACCGCCAATCATTACAATTCAAGGACTTGGACAAGGAGAAGAAGAAGATTACCATTCAGGTCACAAGAAATGGTTATAGGCAGAAAATGTCAATATATGATTTACTTCCCGGTGACATTGTGCATCTTGCTATAGGAGATCAAGTGCCGGCAGATGGCCTATTTCTTTCCGGATTTTCTGTCATGATCGACGAGTCAAGTTTGACTGGAGAGAGTGAACCGGTGATGGTGACTTCTGAAAATCCATTTCTTCTTTCAGGCACTAAGGTCAAAGATGGCTCTTGCAAAATGATGGTTACCACAGTTGGGATGAGTACTCAATGGGGTAAGTTGATGGCAACTCTCAGTGAAGGAGGAGTTGATGAAACCCCGTTGCAGGTGAAGTTAAATGGAGTGGCAACCATTATTGGGAAGATTGGCCTGTTCTTTGCTGTAATTACTTTTGCAGTTTTAGTGCAAAGCCTTTTGAGCCGTAAGTTCCAAGAAGGAAGCCTCTTGACCTGGTCTGGAGATGATGCGTTGCAAACTTTGGAATTCTTTGCTGTTGCAGTTACAATTGTTGTTGTTGCTGTTCCAGAGGGGCTGCCGTTAGCTGTCACATTGAGCCTTGCTTTTGCTATGAAGAAGATGATGAATGACAAAGCCCTTGTCCGAAACTTAGCAGCTTGTGAAACCATGGGATCAGCCACAACTATATGCAGTGACAAGACTGGAACATTAACTACCAACCGCATGACAGTCGTGAAAACATGCATTTGTATGAATAGGAAGGAAGTGAGCAATGATGCTTCTTCTACCTTGCCTTCTGATCTTCCTGATTCTGCTGTGAAAGTCCTGCTACAGTCAATATTTCTTAACACTGGAGGAGAAGTTGCAGTCAATGAAAATGGAAAACGCGAGGTTTTGGGGTCACCAACGGATGCTGCAATATTGGAGTTTGGGTTATCTGTAGGTGGGGACTTTCAGGCAGAGAGAAATGCTTGTAAGCTTGTCAAAGTTGAGCCATTTAACTCTGTAAAGAAAAGGATGGGTGTAATTGTGGAGCTTTCCGAGGGAGGAGGCTTCAGAGCCCACACAAAAGGAGCTTCTGAAATAATTCTGGCTGCCTGTGACAAGGTTATCAATTCCAAAGGTGAGGTTGTTCCGCTTGATGAAGAATATAGGAACCATCTTACGGTGACAATAAACCAATTTGCAAGTGACGCACTTAGGACTCTGTGCATTGCCTACATGGACATGGAAAAGGGATTCTCAGCTGAAGACCCCATTCCAGTTTCTGGGTATACTTGTATTGGAATTGTTGGTATTAAGGATCCTGTTCGTCCTGGTGTTAAAGAATCAGTTGCAGTTTGTCGTTCAGCTGGTATAAAAGTAAGGATGGTTACGGGTGACAATATTGATACTGCAAAGGCTATAGCTAGAGAGTGCGGGATTTTAACAGACGATGGTGTAGCCATTGAAGGTCCAGAATTTAGAGAGAAGAGTCAAGAGGAATTGCTCAAACTGATCCCAAAAATTCAGGTTATGGCCCGTTCTTCACCTATGGACAAGCATACATTGGTAAAACACCTCCGTACCACATTTGGGGAAGTCGTAGCTGTGACTGGTGATGGAACAAATGATGCCCCAGCCCTTCATGAAGCTGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATCATTCTGGATGATAATTTTTCCACAATCGTGACAGTGGCAAAATGGGGACGTTCAGTGTACATAAACATTCAGAAGTTTGTGCAGTTCCAGCTGACTGTTAATGTGGTTGCGTTACTAGTGAACTTCACTTCGGCTTGCTGGACAGGAAGTGCACCCCTTACAGCTGTACAACTACTGTGGGTGAACATGATAATGGACACGCTGGGAGCACTGGCTCTTGCAACTGAACCTCCAAACGATGAATTAATGAAGCGGTCACCAGTAGGAAGGACAGGTAATTTCATTAGCAGCATCATGTGGAGGAACATCTTAGGACAATCATTGTATCAGATTATGGTGATATGGTTTCTTCAGACCAGTGGAAAGTTGTATTTTAACCTCAATGGCCCTGATGCTGATCTGATCCTCAACACGTTAATTTTTAACACATTTGTCTTCTGTCAGGTTTTTAATGAAATAAGCTCACGTGAGATGGAGAAAGTAAATGTTTTCAAAGGCATATTGAATAATTATGTTTTCGTAGGCGTTGTCAGCTGCACTGTTATCTTTCAAATCATAATCGTTGAGTTCTTGGGGACCTTTGCAAACACCACACCTCTCACTCTGCAGCAGTGGTTTTCAAGCATATTTATCGGGCTTTTGGGCATGCCAATTGCAGCTGTCGTAAAGATGCTCTCTGTCTCGATCTAA 3057 0.436 MDQFIDERFTRVRSKNSSREALEKWRNVCGVVKNRKRRFRFTANLSKRDEVAAMRRTNQEKLRVAVLVSKAALQFIQGVPQSDYVVPENVKAEGFQICAEELGSIVEGHDIKKLKYHGGVNGLAGKLSASITDGLSNDPDLLNKRQKIYGINKFTESEARSFWVFVWEALQDMTLMILGVCALVSLIVGIAMEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITIQVTRNGYRQKMSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVMIDESSLTGESEPVMVTSENPFLLSGTKVKDGSCKMMVTTVGMSTQWGKLMATLSEGGVDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQSLLSRKFQEGSLLTWSGDDALQTLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMNRKEVSNDASSTLPSDLPDSAVKVLLQSIFLNTGGEVAVNENGKREVLGSPTDAAILEFGLSVGGDFQAERNACKLVKVEPFNSVKKRMGVIVELSEGGGFRAHTKGASEIILAACDKVINSKGEVVPLDEEYRNHLTVTINQFASDALRTLCIAYMDMEKGFSAEDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGIKVRMVTGDNIDTAKAIARECGILTDDGVAIEGPEFREKSQEELLKLIPKIQVMARSSPMDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACWTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRTGNFISSIMWRNILGQSLYQIMVIWFLQTSGKLYFNLNGPDADLILNTLIFNTFVFCQVFNEISSREMEKVNVFKGILNNYVFVGVVSCTVIFQIIIVEFLGTFANTTPLTLQQWFSSIFIGLLGMPIAAVVKMLSVSI 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4754g00050 1018 FunFam Calcium-transporting ATPase 463 659 - -
Pral4754g00050 1018 Gene3D - 141 336 - -
Pral4754g00050 1018 Gene3D - 168 1013 - -
Pral4754g00050 1018 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4754g00050 1018 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4754g00050 1018 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4754g00050 1018 FunFam Calcium-transporting ATPase 648 800 - -
Pral4754g00050 1018 FunFam Calcium-transporting ATPase 772 1018 - -
Pral4754g00050 1018 Pfam Cation transporter/ATPase, N-terminus 116 185 IPR004014 -
Pral4754g00050 1018 Pfam Cation transport ATPase (P-type) 514 593 - -
Pral4754g00050 1018 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 50 IPR024750 GO:0005516
Pral4754g00050 1018 NCBIfam HAD-IC family P-type ATPase 205 484 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4754g00050 1018 NCBIfam HAD-IC family P-type ATPase 725 836 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4754g00050 1018 NCBIfam HAD-IC family P-type ATPase 547 700 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4754g00050 1018 NCBIfam calcium-translocating P-type ATPase, PMCA-type 109 1015 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral4754g00050 1018 PANTHER CATION TRANSPORTING ATPASE 74 1015 - -
Pral4754g00050 1018 SUPERFAMILY HAD-like 451 860 IPR036412 -
Pral4754g00050 1018 FunFam Calcium-transporting ATPase 216 336 - -
Pral4754g00050 1018 SUPERFAMILY Calcium ATPase, transduction domain A 238 333 IPR008250 -
Pral4754g00050 1018 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Pral4754g00050 1018 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Pral4754g00050 1018 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Pral4754g00050 1018 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Pral4754g00050 1018 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Pral4754g00050 1018 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Pral4754g00050 1018 Gene3D - 17 77 - -
Pral4754g00050 1018 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Pral4754g00050 1018 Pfam E1-E2 ATPase 236 431 - -
Pral4754g00050 1018 SFLD Haloacid Dehalogenase 435 807 - -
Pral4754g00050 1018 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 664 IPR023299 GO:0000166
Pral4754g00050 1018 Gene3D - 463 659 IPR023299 GO:0000166
Pral4754g00050 1018 Pfam Cation transporting ATPase, C-terminus 840 1014 IPR006068 -
Pral4754g00050 1018 FunFam Calcium-transporting ATPase 17 77 - -
Pral4754g00050 1018 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1014 IPR023298 -
Pral4754g00050 1018 CDD P-type_ATPase_Ca_PMCA-like 142 888 - -
Pral4754g00050 1018 Gene3D - 450 800 IPR023214 -
Pral4754g00050 1018 SFLD p-type atpase 435 807 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4754g00050 Pral-Chr4754 258789 264647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4754g00050 1 1016 Primary Pumps ATPases AT4G37640 80.610 0.0 1679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4754g00050 K01537 - gmx:100792691 1684.08