Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4754g00047 ATGGCTGATACCAAGAAATTTGTTCCTCTTCCACCTCCTTATCCCCATCCAGCAGTAGCCAGTTGTTCTTGCAAGGACTTGGTTATGAAAAATTCACCATCAAGAGGACGTAGTTATGTTTCTGTAGCAACAATAGATTTGTGGGAGCGTCTTTTTGACGAAGGTTATAAAGCAGATGTTTTCATTAATACTGATAATGGTGGCATTATTTACGCGCATTCTTATATTCTTGCCATGGCTTCTCCAGTAATGAGAGGCATGCTTAAACGAGCAACACGTCATCGTCATATGAAATCAATCCCGATTTCTGGGGTTCCACATGGCGCTGTTCGAGCTTTCCTTCGATTTTTGTATAGTTCCTGTTACGATAAAGAAGAAATGAGGGAATTCGTGTTACATCTGTTGGTGCTGTCACATGTATTTGCGGTTCCCCACTTGAAGCGTGAATGTGAACAGAAGCTAGAAGCGGATTTCCTCACAATCGACAATATAGTTGATGTGTTTCAACTTGCATTACTATGTGATGCTCCCCGCCTTAGCCTCATTTGTCACCGTCGCATCCTTCAAAATTTTAAAGCAGTTTCCGAGTCCGAAGGGTGGAAGGCCATGAAAGAGAGCCATCCGACTCTAGAGAAGGAACTTCTGGAATCTCTTATCGAGGAAGAAAATAGCACAAAGGAGAGGATCAGAAAAATAAATGAGAAGAAAATTTATCTTCAATTATACGAGGCAATGGAAGCTCTGGTTCACATATATAGAGATGGGTGTCGAACCATTGGCCCACACGATAAAGACTTCAAAGAAAACCAAGCACCATGTAGTTTTGCAGCCTGCAAGAGCTTAGAATTGCTTGTCCGTCATTTTGCTGGGTGCAAGTTGAGAGTCCCTGGTGGTTGCAATCATTGCAAGAGGATGTGGCAGCTTTTGGAGTTGCACTCTCGAATATGTGCCGATCCAGACAACTGTAGGGTTCCTTTATGCAGGAACTTTAAGGAGAGAATATCAAAACAAAGTAAGAAAGATGAAGTTAGGTGGAGAATACTGGTAGAAAAGATCTCGAGAACTAAGGGCATTGCGGTGGCACCATTCTTTCAAAAGCAATGA 1104 0.423 MADTKKFVPLPPPYPHPAVASCSCKDLVMKNSPSRGRSYVSVATIDLWERLFDEGYKADVFINTDNGGIIYAHSYILAMASPVMRGMLKRATRHRHMKSIPISGVPHGAVRAFLRFLYSSCYDKEEMREFVLHLLVLSHVFAVPHLKRECEQKLEADFLTIDNIVDVFQLALLCDAPRLSLICHRRILQNFKAVSESEGWKAMKESHPTLEKELLESLIEEENSTKERIRKINEKKIYLQLYEAMEALVHIYRDGCRTIGPHDKDFKENQAPCSFAACKSLELLVRHFAGCKLRVPGGCNHCKRMWQLLELHSRICADPDNCRVPLCRNFKERISKQSKKDEVRWRILVEKISRTKGIAVAPFFQKQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4754g00047 367 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Pral4754g00047 367 SUPERFAMILY TAZ domain 235 336 IPR035898 -
Pral4754g00047 367 Pfam BTB/POZ domain 50 155 IPR000210 GO:0005515
Pral4754g00047 367 SMART BTB_4 58 158 IPR000210 GO:0005515
Pral4754g00047 367 SUPERFAMILY POZ domain 44 154 IPR011333 -
Pral4754g00047 367 Gene3D TAZ domain 234 355 IPR035898 -
Pral4754g00047 367 CDD BACK 160 203 - -
Pral4754g00047 367 Pfam TAZ zinc finger 242 327 IPR000197 -
Pral4754g00047 367 FunFam BTB/POZ and TAZ domain-containing protein 2 160 230 - -
Pral4754g00047 367 Coils Coil 215 235 - -
Pral4754g00047 367 ProSiteProfiles Zinc finger TAZ-type profile. 232 330 IPR000197 -
Pral4754g00047 367 FunFam BTB/POZ and TAZ domain-containing protein 2 232 357 - -
Pral4754g00047 367 Gene3D Potassium Channel Kv1.1; Chain A 40 158 IPR011333 -
Pral4754g00047 367 Gene3D - 159 233 - -
Pral4754g00047 367 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 33 361 IPR044513 -
Pral4754g00047 367 ProSiteProfiles BTB domain profile. 58 126 IPR000210 GO:0005515
Pral4754g00047 367 SMART TAZ_2 235 328 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4754g00047 Pral-Chr4754 239007 242736 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral4754g00047 BTB 1.8e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4754g00047 - - qsa:O6P43_033903 527.709