Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4754g00045 ATGAAAGCTCGTCATTTGAGCTTCTTTTTTATCATATTATTGTCTCCATTCCTCGTCGTCCCATCTGCAAAAGCGGTCAACACCATCCAATTCCGCACTGTCAATGAATCTCAGTCAAGAAGAATTCTGCACCAGCCATTGTTTCCGGCGACTTCTGCTCCACCGCCAGGCACCGACTCGACTCCACCACCACCACCTTACACTACTCCACCTTCTCCCGACACCGACATTCCCTTCTTTCATGAGGATCCCGCGGGGTCACCTCCAAATCAGAATCAGTCACCACCTTCGATTCCCAATGGCACAATTGCGAACCCAACAGCGACACAACCAACCAAGCCAACAAAGAAGGTCGCAATTGCAATCTCTGTCGGAATTGTCACGCTTGGCATGCTCTCAGCTCTTGCCTTCTTCTTGTACAGGCATCGGGTGAAGCAACCAATCGAGACCCAGAAGCTCGTCGGTGGGAATTCTCAGAGGATTCCTGACGATCCAGGGTTGCCACCATCGAGCTTTCTCTACATTGGGACCGTGGAACCAAACCGAACGTCAGTGACCGATGCGAGTGAGACCAATGGAGCAAACAGGTCTCCTTATCACAAGCTCAATTCTATTAAGCGATCCGAAAGATACCGTCCCAGTCCTGAATTGCAGCCATTGCCGACGTTGAGTAAGCCTCCAGATGGGAATTACCCACCGGCGGTGTCTTCATCATCCGACGACGACGAGGAGAGCCATGAGACGGTGTTTCATTCTCCACAGGGGTCATCATTGAGTTACGAGGATAGCTATTACACCCCAGTTTCGCGTCATAGTTCTCTGGCTAATGGTGGCCAGCAGGCTTCTTTCAGGAATGAGACCTATTCCGCTGCTTCAATCCCATATTCAAAGAGAACTTCACCGAAATCTCGGCTTGCGGCTTCATCGCCGGATATTAGGCAAGTCATGATCCCACCAATTAAGCAGGCTCCGCCTGTGACGGCGCCTGCTCCGCCCCCACAGGTACCAACACTTTCACAGCCGTATCAGCATCTAGACAAAGAAGTGACTAACGGTCATTCCAGAAAGCCGAAATTCTCAGCGCCTCCGCCGGCGCCTAATCTGACGCGTCTTCAGTCAACTAACAACAAACCCCAGAACATATCTAGGACTTCCCTCCATCCTCCTGCTCCTCCTCCTGCTCCGCCTCCTCCACCGCCGCCGCCGCCTCCACCACGGCAATTGGCGCCTGGGAAAGCAGGGTCTCCAGCGGCCAGCGTTTTCTCATCCTCTGCAACAAGGCTCCAACAATCTTGCTCTCCAAACCAAGGAGCCAGTTCTGCGAATAGTGTAACAAAATCTTCAGAAAATGGTGATAAAAGTCTCGGCTCTTCTGGGAGGCTTGAAGCCGATGACACGGAAGGAGCAAAACCCAAGTTAAAGGCTCTACATTGGGATAAAGTGCGCGCGACTTCAGACCGCGCTACAGTGTGGGACCAACTAAAATCAAGCTCATTTCAATTAAATGAGGACATGATGGAAACCTTATTTGGCTGCAATTCCAAAAACCCCGCCCCTAAAGAGCCCATTCGAAGATCAGTTCTTCCACCCGTTGAACAGGAGAACAGAGTGCTGGACCCAAAGAAGTCTCAAAACATAGCTATACTACTTAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGACGCCCTTCTGGATGGGAATCCTGAAGCGTTGGGTGCGGAACTTTTGGAAACTTTAGTGAAAATGGCTCCCACTAAGGAGGAAGAAATAAAACTTAAAAACTGCGGTGGTGACCTCTCAAAACTAGGGTCAGCTGAAAGATTTCTTAAACAAGTGCTTGATATCCCTTTTGCCTTCAAGAGAGTTGAAGCCATGCTATACAGAGCCAACTTTGATGCAGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTCGAGGTAGCAAGTGAGGAATTGAAAAATAGCAGGTTGTTCCTCAAACTTCTTGAAGCTGTTCTCAGGACAGGAAACCGAATGAATGTGGGCACCAACCGAGGTGATGCTAAAGCTTTTAAGCTGGACACACTCTTGAAACTTGCGGACATAAAGGGAACAGATGGAAAGACTACATTGCTTCACTTCGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAAAAGGTGATTCTGCAAATGGAAGTGTTCAGAACCAAGTGAATTCCAAATTCAGTGAGGACGACTTCAGGAAGCAAGGATTGCAGGTTGTGGCCGGGCTTGGGAGGGACCTCAGCAATGTCAAAAAAGCGGCAGGAATGGATTCTGATGTCTTGAGCAGCTACGTCTCAAAACTTGAAAAGGGTCTTGATAAAGTGAGAGTGGCTTTGCAACATGAGAAGCCAGATATGCAAGGGAATTTCTTCCACTCCACGAAGCTATTTCTGCAAAATGCTGAAGAGGAAATCGTTAGAATTAAAGCTGATGAACGAAAGGTCTTAATTCTTGTGAAAGAAGTTACAGAATACTTTCACGGGGACGCAGCCAAGGAGGAAGCCCATCCTTTCAGAATCTTTATGATTGTTAGGGATTTCCTAAATATCTTGGACCAGGTGTGCAAAGAAGTGGGGAGGATGCAGCAGGATAGAACCGTCATAGGCTCTTCCAGATCCTTCCGGATAGCTGCAAGTGCATCATTACCAGTTCTAAACAGGTACAATGCGAGACAAGATAGAAGTTCCGATGAAGAAAGCTCGTCACCCTAG 2739 0.4845 MKARHLSFFFIILLSPFLVVPSAKAVNTIQFRTVNESQSRRILHQPLFPATSAPPPGTDSTPPPPPYTTPPSPDTDIPFFHEDPAGSPPNQNQSPPSIPNGTIANPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVKQPIETQKLVGGNSQRIPDDPGLPPSSFLYIGTVEPNRTSVTDASETNGANRSPYHKLNSIKRSERYRPSPELQPLPTLSKPPDGNYPPAVSSSSDDDEESHETVFHSPQGSSLSYEDSYYTPVSRHSSLANGGQQASFRNETYSAASIPYSKRTSPKSRLAASSPDIRQVMIPPIKQAPPVTAPAPPPQVPTLSQPYQHLDKEVTNGHSRKPKFSAPPPAPNLTRLQSTNNKPQNISRTSLHPPAPPPAPPPPPPPPPPPRQLAPGKAGSPAASVFSSSATRLQQSCSPNQGASSANSVTKSSENGDKSLGSSGRLEADDTEGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSKNPAPKEPIRRSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSDALLDGNPEALGAELLETLVKMAPTKEEEIKLKNCGGDLSKLGSAERFLKQVLDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTLEVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGAKGDSANGSVQNQVNSKFSEDDFRKQGLQVVAGLGRDLSNVKKAAGMDSDVLSSYVSKLEKGLDKVRVALQHEKPDMQGNFFHSTKLFLQNAEEEIVRIKADERKVLILVKEVTEYFHGDAAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQQDRTVIGSSRSFRIAASASLPVLNRYNARQDRSSDEESSSP 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4754g00045 912 MobiDBLite consensus disorder prediction 176 201 - -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 385 410 - -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 96 114 - -
Pral4754g00045 912 SUPERFAMILY Formin homology 2 domain (FH2 domain) 395 873 - -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 366 384 - -
Pral4754g00045 912 PANTHER FORMIN-RELATED 367 906 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral4754g00045 912 ProSiteProfiles Formin homology-2 (FH2) domain profile. 463 887 IPR015425 -
Pral4754g00045 912 SMART it6_source 463 875 IPR015425 -
Pral4754g00045 912 Pfam Formin Homology 2 Domain 467 860 IPR015425 -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 46 114 - -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 155 262 - -
Pral4754g00045 912 Gene3D Formin, FH2 domain 460 872 IPR042201 -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 294 468 - -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 49 73 - -
Pral4754g00045 912 PRINTS Proline rich extensin signature 221 237 - -
Pral4754g00045 912 PRINTS Proline rich extensin signature 384 409 - -
Pral4754g00045 912 PRINTS Proline rich extensin signature 207 219 - -
Pral4754g00045 912 PRINTS Proline rich extensin signature 318 334 - -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 417 455 - -
Pral4754g00045 912 MobiDBLite consensus disorder prediction 322 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4754g00045 Pral-Chr4754 231971 236451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4754g00045 457 902 FH2 protein (formin) Gene Family AT5G67470 74.723 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4754g00045 - - pcin:129322910 1427.92