Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4754g00014 ATGGCCATGCCACGCCCATCCACGTGGTCTCACTTAGGGCCTGCCATACCTGCTCTCTGTACTCAATTTCGTTCACTTCATTTTGAAACTCAAGGAAGAAATCTGGCTTCTCTTCTCGGATATGATCGATCCGTCGGGATCTATCACCGGCGGCCAATTTCTCAAATATCATTTATATCACACTGCAATGACTCCATACGCTATCGCACGTTCCTTTGTCCAATTTGTAGAGCTCACGGTTTCAGTAGTGACTCGGAGTCAGCTGGGACCAATTTCCCGGTGGAAAATGCGTACGAGCTGTTAGGAGTGTCACAGACCAGTTCGTTTGCTGAGATCAAAGCGTCTTTTCGCAGATTGGCCAAGGAAACTCACCCTGACCTTGCTGACTCAAATAACGATTCATCTGCGTCGCGACGATTTGTGCAAATCCTGGCTGCCTACGAGATTCTTTCAGATTCCAAGAAGAGAGCTCATTATGACAGATACCTGTTGTCTCAAAAGAAGCTTGTCGAGAAGCATACTAGGCAGGGTTCAAAATTACAATTCTATACATCACATGAAACAATTTCCAAGGAGATGGAAGTTGTTGAATGGTTAAAGTGGTACAGATTAGCTATAAGTGATATTTTGTCAGAGAAGAGGGTAGTAGTTGGAACAGGCTATTTTGATGTACTTGAGAGAGATTTTTACTCAGCCATACATGCGGCTTACTTTGGCCCTGAAATTGAGTCAATGGAACTTCTCCCTGAGTGCTTTGAGGCTGAGGAAAGGTCCTCTTGTGAAACACCAGAGGTTCTGCACATTGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGCCAATAAGAACCCAGAGATATCATCTAGGAATAATGAAAAGTTAACTTCTTTCAGATCCTCTCATTCAGGCCTATGTCAATCTTTAAAGAACGCAAGCATCCACACAAATGCAGAAGTTCCGTATGGTCCACAAATTCACGAGTCTAAAATATCAAGTCATATATCAGATGCATATAGAGATCTAGAATTGCATATCTCTAGGAGGGTGGTTGCTGTGGCCTCCAGGGTCCCTCCTGGATGCTATTCTGATGCTGAAGTAGCAGAAGATCGCATTCATGTTTATCTTAATTCAGATGAATACACCAAGCATATAAACGGCTGCGGTTCTGAAAATTACTTCACAAGTAGTTCAGCTGTCGCGCAAATTCATATAGGAACCATAGCTGGGCTTGGGACCAGTCCAGAAGAAGGTTCCTGTAATGTGTATGACAGTAGGGGGGCCAAGACCCATGTGATTATGAAACACAGGACCTTGCTGGTGAAGCACATGCACTGGTATCAAGTTGGGGAAGAAGTTTCTATTTGTGAGTGTAGATGCACGAGGGCCAAATTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGGTGTGGTTTTCATGACGTAGGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGAAAGGTCGAACAATCCCATCTCAAAGGTTATGGGATGGCTGGGATGATGGTCAGCATTTTGAGAGAAGACTTCATCCGGCAATGTATCTACTTGCTCTTGCATATAGGACACTTGATCTTGAATATGCTAAAGTAAGAAAACAAACATTTAGGAAAGCTGTGGAAGGGCACCTGTTTAGAATCCTTCATTGGTGCAAAAGACTTGGTTAA 1692 0.435 MAMPRPSTWSHLGPAIPALCTQFRSLHFETQGRNLASLLGYDRSVGIYHRRPISQISFISHCNDSIRYRTFLCPICRAHGFSSDSESAGTNFPVENAYELLGVSQTSSFAEIKASFRRLAKETHPDLADSNNDSSASRRFVQILAAYEILSDSKKRAHYDRYLLSQKKLVEKHTRQGSKLQFYTSHETISKEMEVVEWLKWYRLAISDILSEKRVVVGTGYFDVLERDFYSAIHAAYFGPEIESMELLPECFEAEERSSCETPEVLHIVSGRDLFGMVCLANKNPEISSRNNEKLTSFRSSHSGLCQSLKNASIHTNAEVPYGPQIHESKISSHISDAYRDLELHISRRVVAVASRVPPGCYSDAEVAEDRIHVYLNSDEYTKHINGCGSENYFTSSSAVAQIHIGTIAGLGTSPEEGSCNVYDSRGAKTHVIMKHRTLLVKHMHWYQVGEEVSICECRCTRAKLPPSKFWLFEPRCGFHDVGGWYVETYGKDKKGRTIPSQRLWDGWDDGQHFERRLHPAMYLLALAYRTLDLEYAKVRKQTFRKAVEGHLFRILHWCKRLG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4754g00014 563 Gene3D DnaJ domain 86 183 IPR036869 -
Pral4754g00014 563 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 67 562 - -
Pral4754g00014 563 CDD DnaJ 96 152 IPR001623 -
Pral4754g00014 563 ProSitePatterns Nt-dnaJ domain signature. 140 159 IPR018253 -
Pral4754g00014 563 Pfam DnaJ domain 96 160 IPR001623 -
Pral4754g00014 563 PRINTS DnaJ domain signature 98 116 IPR001623 -
Pral4754g00014 563 PRINTS DnaJ domain signature 116 131 IPR001623 -
Pral4754g00014 563 PRINTS DnaJ domain signature 135 155 IPR001623 -
Pral4754g00014 563 SMART dnaj_3 95 155 IPR001623 -
Pral4754g00014 563 SUPERFAMILY Chaperone J-domain 94 165 IPR036869 -
Pral4754g00014 563 ProSiteProfiles dnaJ domain profile. 96 163 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4754g00014 Pral-Chr4754 88318 92904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4754g00014 98 160 C2H2 Transcription Factor Family AT1G74250 46.970 2.01e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4754g00014 - - gmx:100801323 735.717